PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0030s0084.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 489aa MW: 53274.8 Da PI: 8.5435

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0030s0084.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.4	2.5e-05	78	100	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H Kaladp0030s0084.1.p 78 FVCEICHKGFQRDQNLQLHRRGH 100 89*******************88 PP
2	zf-C2H2	15.7	4.4e-05	154	176	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H++t+ Kaladp0030s0084.1.p 154 WKCDKCSKKYAVQSDWKAHQKTC 176 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MSNLTGDAVS VTSAADSGEE DDMHPQSQIK VVSAAASNRN GSLQLPPVKK RRNLPGTPDP 60 AAEVVALSPT TLMATNRFVC EICHKGFQRD QNLQLHRRGH NLPWKLRQRS SAEVKKRVYI 120 CPEPSCVHHN PARALGDLTG IKKHFSRKHG EKKWKCDKCS KKYAVQSDWK AHQKTCGTRE 180 YKCDCGTIFS RRDSFITHRA FCDALAEENS KVNQEQQEMG MAVNGSDPNL QTHVLELKSS 240 SVPDFGSFDP KNPLKSIPQK LVPTPFKPTM NPNAGGFSAR PGTLFSSPPS SLQLGSNSST 300 RFNSYVQDTN HYGGSMPNAY SSATALLQKA AQMGATASNN TINSPMMQQS YNVSSMAGAD 360 QVPRQPQPDY VPMFENHQPR QQMLGGGCRT NQQMLEAAAD ESSTAMNEQM SMFSRVFMNG 420 GDQGHNISSL FEGLEQVDSV SGTSGANKVQ PGLSMTAFGS VGDLIPTVDF LGVGGSRPCD 480 LHRQEERF*

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MSNLTGDAVS VTSAADSGEE DDMHPQSQIK VVSAAASNRN GSLQLPPVKK RRNLPGTPDP  60
AAEVVALSPT TLMATNRFVC EICHKGFQRD QNLQLHRRGH NLPWKLRQRS SAEVKKRVYI  120
CPEPSCVHHN PARALGDLTG IKKHFSRKHG EKKWKCDKCS KKYAVQSDWK AHQKTCGTRE  180
YKCDCGTIFS RRDSFITHRA FCDALAEENS KVNQEQQEMG MAVNGSDPNL QTHVLELKSS  240
SVPDFGSFDP KNPLKSIPQK LVPTPFKPTM NPNAGGFSAR PGTLFSSPPS SLQLGSNSST  300
RFNSYVQDTN HYGGSMPNAY SSATALLQKA AQMGATASNN TINSPMMQQS YNVSSMAGAD  360
QVPRQPQPDY VPMFENHQPR QQMLGGGCRT NQQMLEAAAD ESSTAMNEQM SMFSRVFMNG  420
GDQGHNISSL FEGLEQVDSV SGTSGANKVQ PGLSMTAFGS VGDLIPTVDF LGVGGSRPCD  480
LHRQEERF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44160.1	1e-103	C2H2 family protein