PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0030s0014.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 621aa    MW: 69167.2 Da    PI: 6.9064
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0030s0014.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix96.62.3e-3070155187
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                          rW++qe+laL+++r++m+ ++r+++lk+plW++vs+km+e g++rs+k+Ckek+en+ k++k++++g++++ s+ ++t+++fd+lea
  Kaladp0030s0014.1.p  70 RWPRQETLALLKIRSDMDLAFRDSNLKGPLWDDVSRKMAELGYHRSAKKCKEKFENVYKYHKRTRDGRSSK-SDGKKTYRFFDELEA 155
                          8*********************************************************************8.66667*******985 PP
2trihelix94.78.6e-30427511186
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                          rW+k ev aLi++r++ e +++++  k+p Wee+s+ m++ g++r++k+Ckekwen+nk++kk+ke++k+r +++s+tcpy++ l+
  Kaladp0030s0014.1.p 427 RWPKAEVEALIKLRTSFEIKYQENGPKGPFWEEISAGMSSLGYNRNAKRCKEKWENINKYFKKVKESNKQR-PQASKTCPYYHLLD 511
                          8********************************************************************98.999********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 621 aa     Download sequence    
MLGGGGGGGG ASVAMLVSSC QESGGDKAAS HDPNNNCSLA GVFGEEEINN ARNGNSMEDG  60
DRNSGGSSHR WPRQETLALL KIRSDMDLAF RDSNLKGPLW DDVSRKMAEL GYHRSAKKCK  120
EKFENVYKYH KRTRDGRSSK SDGKKTYRFF DELEALDQLQ PFQVPPPLQQ RQQVSSHLKA  180
PPFPMQPPPA PLALQIPTAT TISFSQLPCR NSDINNPIST AAPITPAPTN PTTIISPHFQ  240
STATNFMLST SSSTSSDDFQ QRRRTEKKRK WKDFFEKLMR DVVDKQEELQ NKFLRTIEMR  300
ERDRSMREEA WRMQEMARLN REHDILVQER SAAAAKDAAI IAFLQKIAGQ QQPQTQPPSP  360
QPKPQPPPHT IIQLDPSSTP PPPQPQPQPQ PQPQPKPLSV MKPDSNASGD QNNLTMVCGS  420
TLPSSSRWPK AEVEALIKLR TSFEIKYQEN GPKGPFWEEI SAGMSSLGYN RNAKRCKEKW  480
ENINKYFKKV KESNKQRPQA SKTCPYYHLL DAIYKEKKGG GGDNDNFLPP PSANFSMEPL  540
MVQPEQQWPL APQAQARHNE DEEQDDMLDE DELEQDMEDE REDGKEENNG GTYEVVATAS  600
NKAQHGASAA TGSLGATAVA *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1261270QRRRTEKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.11e-68Trihelix family protein