PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0029s0144.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

CO-like

Protein Properties

Length: 372aa MW: 39824.4 Da PI: 6.232

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0029s0144.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	29	2.3e-09	25	57	4	36
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36 + C+ +++ ++lfC++++ +lC C +++H Kaladp0029s0144.1.p 25 KLCDSCKSATATLFCRNDSAFLCVACDSKIHAA 57 58*****************************54 PP
2	zf-B_box	25.5	2.6e-08	67	111	3	41
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 ++C+ +e+ +++ C+ + lC +C +H+ H++ p Kaladp0029s0144.1.p 67 VWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSAnplarrHERLP 111 689*****************************6688888898877 PP
3	CCT	70.1	5.7e-24	297	340	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+++RY+eKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k+a Kaladp0029s0144.1.p 297 REARVMRYREKRKSRKFEKTIRYASRKAYAETRPRIKGRFAKRA 340 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MGEAKKLPTW PTATPAAAAA IAASKLCDSC KSATATLFCR NDSAFLCVAC DSKIHAANKL 60 ASRHARVWMC EVCEQAPAHV TCKADAAALC VTCDRDIHSA NPLARRHERL PVVPFYDSAA 120 HHGGDKFANG YFVAACDADE AEAASWLMPN LNSKLEDPEQ AQASFNMYAD VDPYLDLDFG 180 PKDFQNKQEA NHEHNSSGAD GVVPEQCNKI SDAPTLFAGN GAGDDPCFDV DFIEPAKGFP 240 YFASANAHSI SHSVSSSSHE VGVVPDGGTM IDVSNPFGRQ SGGEAAAQAV PLFGAEREAR 300 VMRYREKRKS RKFEKTIRYA SRKAYAETRP RIKGRFAKRA DGGDVAGVEQ MYDMNSPAIG 360 GGEAYGVVPS Y*

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MGEAKKLPTW PTATPAAAAA IAASKLCDSC KSATATLFCR NDSAFLCVAC DSKIHAANKL  60
ASRHARVWMC EVCEQAPAHV TCKADAAALC VTCDRDIHSA NPLARRHERL PVVPFYDSAA  120
HHGGDKFANG YFVAACDADE AEAASWLMPN LNSKLEDPEQ AQASFNMYAD VDPYLDLDFG  180
PKDFQNKQEA NHEHNSSGAD GVVPEQCNKI SDAPTLFAGN GAGDDPCFDV DFIEPAKGFP  240
YFASANAHSI SHSVSSSSHE VGVVPDGGTM IDVSNPFGRQ SGGEAAAQAV PLFGAEREAR  300
VMRYREKRKS RKFEKTIRYA SRKAYAETRP RIKGRFAKRA DGGDVAGVEQ MYDMNSPAIG  360
GGEAYGVVPS Y*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24930.1	1e-111	CO-like family protein