PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0029s0094.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | C2H2 | ||||||||
Protein Properties | Length: 195aa MW: 21876.2 Da PI: 10.5746 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15 | 7.1e-05 | 72 | 92 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ C+k F r nL+ H r H Kaladp0029s0094.1.p 72 CEVCNKGFQRDQNLQLHRRGH 92 *******************88 PP | |||||||
2 | zf-C2H2 | 12.7 | 0.00037 | 147 | 169 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + ks+ k H + + Kaladp0029s0094.1.p 147 WKCDKCSKKYAVKSDWKAHSKIC 169 58*****************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MSQGLSPVPS SILGFVGDQS KNPDSSNSPA TQPSASSSTL KRKRSLPGTP DPDSEVIALS 60 PTSLMATNRF LCEVCNKGFQ RDQNLQLHRR GHNLPWKLKQ RSNKEVVKKK VYICPEKSCV 120 HHDPSRALGD LTGIKKHFSR KHGEKKWKCD KCSKKYAVKS DWKAHSKICG KERNDTECML 180 RLCLAKKQFS RKEK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G45260.1 | 3e-76 | C2H2 family protein |