PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0029s0084.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 1027aa MW: 113501 Da PI: 4.9275

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0029s0084.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.3	3.7e-18	39	85	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l Kaladp0029s0084.1.p 39 KGQWTAEEDEILSKAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 85 799**************************9.**********986 PP
2	Myb_DNA-binding	62.1	1.2e-19	91	137	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ede +v++v+q+G + W+tIa++++ gR +kqc++rw+++l Kaladp0029s0084.1.p 91 KGPWSKQEDEVIVQLVNQYGAKKWSTIAQHLP-GRIGKQCRERWHNHL 137 79****************************.***********97 PP
3	Myb_DNA-binding	46.4	9.1e-15	143	185	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r++WT+ E++ l++a++ +G++ W+ + ++ gRt++ +k++w+ Kaladp0029s0084.1.p 143 RDAWTQKEELALIQAHQIYGNK-WAELTKFLP-GRTDNAIKNHWN 185 789*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1027 aa Download sequence
MDSDHRTMTH ASQNGADDRR LKVRPPHGRT TGPTRRSTKG QWTAEEDEIL SKAVQRFKGK 60 NWKKIAECFK DRTDVQCLHR WQKVLNPELI KGPWSKQEDE VIVQLVNQYG AKKWSTIAQH 120 LPGRIGKQCR ERWHNHLNPT INRDAWTQKE ELALIQAHQI YGNKWAELTK FLPGRTDNAI 180 KNHWNSSVKK KMESYIASGL LSQLQCLPLD GQNLSMSSPA SRMQQSSGDE SNLKEGNDVE 240 DISECSQGST APGCSLNASD MNNRILHARS EFMHTNCSGQ MKQERCSPQS SEAYFASIEE 300 VNMSIPEIVV NCSLLDRNSS HTSGGLLAND DYNLQEFPGM SLLELGQDQP YGPTANGSNE 360 MLHLPYYNSS LVTASISSGN TVIEPEKTEK FLVSESTSCL PISIPSNAGA DGCGVCHSLS 420 FSNAVEMDGC EDSLILQASN LQIQDSMGTS ASHSTFMRSE VEENSCFQAP SSGPPYLNFH 480 DNKLSYGCGP SQVDHFPPGT QEQDLAGSPC NEFMLTEDFT EPLCNGGTES TDLHGHLNYQ 540 QYTDHLPDEP IERLDECTHI IDELPTAKIE GREQDNGSLF YEPPRFPSLD VPFFSCDLVQ 600 SSNDLQQEYS PLGIRQLMMS SVNCLTPFRL WDSPTRENSP DALLKSAAKT FSGTPSILKK 660 RHRDLLSPLS DRRKDKRLDS DSKQKSFSSL ARDFSNLDAM FEETATCSTA TQKRDSGEFS 720 DDKENVDPAV MRQKEVERGG SGSEKESSFC RTEENKSSNY GLDQESQHDA GVDGHVQKSS 780 ENLADNDLEN ILIFSPDQVG LEADKVFVPS AWANPPSSGS RHTPSSINSP SVNWSRSHVI 840 GSSSKCMTPS CLEIAVSNAG LEMGIEIGNM FGGTPFKISF ESPSAWKSPW FMNSFLPGPR 900 VDTDITIEDI GYFLSPGERS CDALGLMEQL SERSAAAIAE AHEMLGNETP KAILRETHAK 960 SANAGHPDTS DNQPGSLSRF APDMLPERQV LDFSECETPN KEKEVRRAFP SVKLLSPSSY 1020 LVKGCR*

Sequence ? help Back to Top

Protein Sequence Length: 1027 aa Download sequence

MDSDHRTMTH ASQNGADDRR LKVRPPHGRT TGPTRRSTKG QWTAEEDEIL SKAVQRFKGK  60
NWKKIAECFK DRTDVQCLHR WQKVLNPELI KGPWSKQEDE VIVQLVNQYG AKKWSTIAQH  120
LPGRIGKQCR ERWHNHLNPT INRDAWTQKE ELALIQAHQI YGNKWAELTK FLPGRTDNAI  180
KNHWNSSVKK KMESYIASGL LSQLQCLPLD GQNLSMSSPA SRMQQSSGDE SNLKEGNDVE  240
DISECSQGST APGCSLNASD MNNRILHARS EFMHTNCSGQ MKQERCSPQS SEAYFASIEE  300
VNMSIPEIVV NCSLLDRNSS HTSGGLLAND DYNLQEFPGM SLLELGQDQP YGPTANGSNE  360
MLHLPYYNSS LVTASISSGN TVIEPEKTEK FLVSESTSCL PISIPSNAGA DGCGVCHSLS  420
FSNAVEMDGC EDSLILQASN LQIQDSMGTS ASHSTFMRSE VEENSCFQAP SSGPPYLNFH  480
DNKLSYGCGP SQVDHFPPGT QEQDLAGSPC NEFMLTEDFT EPLCNGGTES TDLHGHLNYQ  540
QYTDHLPDEP IERLDECTHI IDELPTAKIE GREQDNGSLF YEPPRFPSLD VPFFSCDLVQ  600
SSNDLQQEYS PLGIRQLMMS SVNCLTPFRL WDSPTRENSP DALLKSAAKT FSGTPSILKK  660
RHRDLLSPLS DRRKDKRLDS DSKQKSFSSL ARDFSNLDAM FEETATCSTA TQKRDSGEFS  720
DDKENVDPAV MRQKEVERGG SGSEKESSFC RTEENKSSNY GLDQESQHDA GVDGHVQKSS  780
ENLADNDLEN ILIFSPDQVG LEADKVFVPS AWANPPSSGS RHTPSSINSP SVNWSRSHVI  840
GSSSKCMTPS CLEIAVSNAG LEMGIEIGNM FGGTPFKISF ESPSAWKSPW FMNSFLPGPR  900
VDTDITIEDI GYFLSPGERS CDALGLMEQL SERSAAAIAE AHEMLGNETP KAILRETHAK  960
SANAGHPDTS DNQPGSLSRF APDMLPERQV LDFSECETPN KEKEVRRAFP SVKLLSPSSY  1020
LVKGCR*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	671	678	DRRKDKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein