PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0029s0050.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HB-other

Protein Properties

Length: 285aa MW: 32414.4 Da PI: 4.1772

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0029s0050.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	2e-09	215	262	6	53
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 +++k q+++Le+++++++ p+ +++ + + ++L+ ++V WF +R Kaladp0029s0050.2.p 215 RLKKVQVDTLERVYRRTKRPTNTMISSIVHVTNLPRKKVVKWFEDKRS 262 67899***************************************9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MITLLQKNVS KDVVQEEDVD EDAFEALFAQ LEEDLKNDPS IEDEDGELTE EELAKLESEL 60 EEAMMEDDDF FKMLNATAGG TENDGDGDED EEGEEDEEEE EDVEEDKSVK LKNWQLRRLA 120 RALKVGRRKT SIKSLAAELC LERPLVLEML GNPPPKLLMM SAMLPDESVQ PAMTESLATP 180 VEVVETVPEE KIVVLDTDKK VPIHAMQSQW SSQKRLKKVQ VDTLERVYRR TKRPTNTMIS 240 SIVHVTNLPR KKVVKWFEDK RSEDGVPTER LPYERSTTET VFSS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	214	255	KRLKKVQVDTLERVYRRTKRPTNTMISSIVHVTNLPRKKVVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11270.1	1e-63	HB-other family protein