PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0029s0020.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARR-B
Protein Properties Length: 672aa    MW: 76029.4 Da    PI: 6.4074
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0029s0020.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like72.84.8e-23202255155
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          k+r+ Wt +LH++Fv+av+   G ek  Pk+il+ m+v+ Lt+e+v+SHLQkYRl
  Kaladp0029s0020.1.p 202 KARVIWTVDLHQKFVNAVNLV-GLEKIGPKKILDSMNVPWLTRENVASHLQKYRL 255
                          68*****************99.********************************8 PP
2Myb_DNA-binding33.21.2e-10206254348
                          SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                           WT ++++++v+av++ G +   +k+I   m+   +t++++ s++qky+
  Kaladp0029s0020.1.p 206 IWTVDLHQKFVNAVNLVGLEkiGPKKILDSMNvPWLTRENVASHLQKYR 254
                          5******************9****************************7 PP
3Response_reg75.42.1e-25221301109
                          EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHH CS
         Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedale 88 
                          vl+vdD+ + +++l+++l+k  y ev+++  ++eal +l++++  +D+++ D++mp+mdG++ll++   e  +lp+i+++  ge + + +
  Kaladp0029s0020.1.p  22 VLVVDDDLTWLKILEKMLKKCFY-EVTTCCLAREALSILRQRKdgFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMK 109
                          89*********************.***************888889**********************6644.8***************** PP

                          HHHTTESEEEESS--HHHHHH CS
         Response_reg  89 alkaGakdflsKpfdpeelvk 109
                           ++ Ga d+l Kp+ ++el++
  Kaladp0029s0020.1.p 110 GVQHGACDYLLKPIRMKELRN 130
                          ******************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 672 aa     Download sequence    
MMMEKSAFAS PQTDAFPAGP RVLVVDDDLT WLKILEKMLK KCFYEVTTCC LAREALSILR  60
QRKDGFDIVI SDVNMPDMDG FKLLEHVGLE MDLPVIMMSV DGETSRVMKG VQHGACDYLL  120
KPIRMKELRN IWQHVFRKRI HEVRDAENHE GFEAIQMVRI GCEQSDLEYY LSGGHDLSAT  180
RKRKDAVHKH NDRELGDAFA KKARVIWTVD LHQKFVNAVN LVGLEKIGPK KILDSMNVPW  240
LTRENVASHL QKYRLYLSRL HKYNGDEALE MANHLDLDFC RVKHSDVLTK DSKEISFSTE  300
EPITEKHINS SSGASSSNSY YWGDHKIQDT KFRNFTLPDL KVEPIFGLNA DDPESQSMKY  360
SWPDASHRLE TVESDAQFAN SDPNITSKYS RSGEIRDIHY ELVNKQKQWL DDGFNSWSLP  420
NRQYHPQPNQ RNSLLSANTG SSHWEKEITS LSVEPHHLKP SLSAHVVKIL SEGETSVENN  480
PPSVEQGFHH DHVKGKAPLE HKFDTGFKAA HTSSLQTPVS HLLASPSVYL GTSNRETHTS  540
SSVKNKPPQS EQVTNSDRDT TSLETGSPML RAPTVGSFIA SQRFEYAESE LALVAFGKDY  600
KVNGDHGEYT SSNSYDFLPI TKPDIQANVP LHLYDAMRFD FCYEAAGFPM IDQSLSIVDT  660
AHFTSSYYPV S*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.11e-113ARR-B family protein