PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0028s0085.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 168aa MW: 17925.8 Da PI: 10.0837 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.8 | 8.7e-16 | 28 | 76 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y GVr +k +g+WvAeIr+p++ r r++lg++ ta Aa+a++ a l+g Kaladp0028s0085.1.p 28 YNGVRMRK-WGKWVAEIREPRK---RSRIWLGTYKTAVAAARAHDVALFHLRG 76 78***999.**********954...5**********************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MEDNRSGGGR GSSQSRAVFG AGRAGREYNG VRMRKWGKWV AEIREPRKRS RIWLGTYKTA 60 VAAARAHDVA LFHLRGRSEK LNFPEHFVGR VSVEMSAEEI RRMATAVGAE VDAAELGMRR 120 RKAADEPSRS GGAESGEGEG GGVGSARPDL NQLPDLDGSD GDVSGGE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50260.1 | 1e-29 | ERF family protein |