PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0028s0022.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 296aa    MW: 33807.8 Da    PI: 10.495
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0028s0022.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.59e-1718107299
                          EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                   B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                          fkv+     +  + + +p  f++++ g    ++++ l  ++grsW + + ++ +++r++ ++GWkeF++ n Lk+gDf+vF++ ++s+f 
  Kaladp0028s0022.1.p  18 FKVM--VGDFL-KKMLVPIAFVRRFHGT--FPQEVLLDCPTGRSWWIGV-VKDGPDRMYCQRGWKEFAQGNSLKVGDFLVFRYARNSKF- 100
                          5555..22333.34788********877..6779***************.688888999************************999999. PP

                          .EEEEE-S CS
                   B3  92 lvvkvfrk 99 
                            v +++k
  Kaladp0028s0022.1.p 101 -DVEIYEK 107
                          .7777665 PP
2B346.95.1e-15192291496
                          E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE.........EEETTE.....EEE-TTHHHHHHHHT--TT-EE CS
                   B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliy.......rkksgr.....yvltkGWkeFvkangLkegDfv 80 
                          v ++++ +++g + +p +f++++ +    sk+l+l++ +s+++W v ++        r    +     +   + W +F+++n+L++g ++
  Kaladp0028s0022.1.p 192 VALSASGFNRGHVNVPASFCKKFPEL--HSKQLKLRTaSSSKVWAVSCKSylgrrkdR----KgsamqTRVHGAWARFARDNELRVGNVC 275
                          556778899999********999533..5678999996777*******6669975432....23434566679***************** PP

                          EEEE-SSSEE..EEEE CS
                   B3  81 vFkldgrsefelvvkv 96 
                          vF+l++r++ e v+kv
  Kaladp0028s0022.1.p 276 VFELVDRNSHEVVFKV 291
                          ***9988777676665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MGRPRPARLH NQNCESFFKV MVGDFLKKML VPIAFVRRFH GTFPQEVLLD CPTGRSWWIG  60
VVKDGPDRMY CQRGWKEFAQ GNSLKVGDFL VFRYARNSKF DVEIYEKSGC LKEVSAIFEE  120
PSDRPAMKTE DCSLDEITVV PAVHPFTPSP DNMSTQGRDT KDSQPRRRMQ RPDPVAREQA  180
NKFNSNRPFF GVALSASGFN RGHVNVPASF CKKFPELHSK QLKLRTASSS KVWAVSCKSY  240
LGRRKDRKGS AMQTRVHGAW ARFARDNELR VGNVCVFELV DRNSHEVVFK VHIFR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-21B3 family protein