PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0026s0139.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 540aa MW: 61411.6 Da PI: 5.1696

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0026s0139.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92.8	3.4e-29	60	143	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+++e+laLi++r++m+ ++r++++k+plW+evs+k+++ gf+rs+k+Ckek+en+ k+y+++ke ++ ++ +t+++f+qlea Kaladp0026s0139.1.p 60 RWPHDETLALIKVRSDMDAAFRESSAKGPLWDEVSRKLAALGFNRSSKKCKEKFENIYKYYRRTKELGQR---PNGKTYRFFEQLEA 143 8***************************************************************9997...45668*****85 PP
2	trihelix	102	4.7e-32	360	444	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++ ev aLi +r+ + + +++ k+plWee+s++m++rg+ rs+k+Ckekwen+nk++k++++++kkr +e+s+tcpyf+ l+ Kaladp0026s0139.1.p 360 RWPRAEVEALISVRSTFDMHCQENGPKGPLWEEISAAMKKRGYDRSAKRCKEKWENINKYFKRVRDSNKKR-PEDSRTCPYFHLLD 444 8*******************************************************************8.99*******997 PP

Sequence ? help Back to Top
Protein Sequence Length: 540 aa Download sequence
MLEASSLSAP AAAQGLLVVD GAEEENAKGG GIDNQVMGVL DEDERVREFE EHDRNFAGNR 60 WPHDETLALI KVRSDMDAAF RESSAKGPLW DEVSRKLAAL GFNRSSKKCK EKFENIYKYY 120 RRTKELGQRP NGKTYRFFEQ LEAIDHYPQP LTAISPSVMN QLESADRSLW IPDTTVAINV 180 DPLNVCVNAG VECQVQNAGN NSGNGNNYAM NSSTWTNSRS KESEGMSRKA KKKRKFLEFF 240 DRLMMEVTVK QEELQRRCVE AIERYEFDRI KREEAWRVQE MARIRREHEM LAHERSIAAA 300 KDAAVIALLQ KFSQQEIPVQ FTENNPITVA PKEKSLKEVE KNTADVDKPD AVLQNSSSSR 360 WPRAEVEALI SVRSTFDMHC QENGPKGPLW EEISAAMKKR GYDRSAKRCK EKWENINKYF 420 KRVRDSNKKR PEDSRTCPYF HLLDNLYKQK AGNNINAKID GDSNVTSSGE NMNSSNLLAP 480 PVSYDMGQQQ NELARMVGSN MDPNLDESAD NEEEEEEEAS EDGENYRVMM NSNQMAIVE*

Sequence ? help Back to Top

Protein Sequence Length: 540 aa Download sequence

MLEASSLSAP AAAQGLLVVD GAEEENAKGG GIDNQVMGVL DEDERVREFE EHDRNFAGNR  60
WPHDETLALI KVRSDMDAAF RESSAKGPLW DEVSRKLAAL GFNRSSKKCK EKFENIYKYY  120
RRTKELGQRP NGKTYRFFEQ LEAIDHYPQP LTAISPSVMN QLESADRSLW IPDTTVAINV  180
DPLNVCVNAG VECQVQNAGN NSGNGNNYAM NSSTWTNSRS KESEGMSRKA KKKRKFLEFF  240
DRLMMEVTVK QEELQRRCVE AIERYEFDRI KREEAWRVQE MARIRREHEM LAHERSIAAA  300
KDAAVIALLQ KFSQQEIPVQ FTENNPITVA PKEKSLKEVE KNTADVDKPD AVLQNSSSSR  360
WPRAEVEALI SVRSTFDMHC QENGPKGPLW EEISAAMKKR GYDRSAKRCK EKWENINKYF  420
KRVRDSNKKR PEDSRTCPYF HLLDNLYKQK AGNNINAKID GDSNVTSSGE NMNSSNLLAP  480
PVSYDMGQQQ NELARMVGSN MDPNLDESAD NEEEEEEEAS EDGENYRVMM NSNQMAIVE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-109	Trihelix family protein