PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0026s0080.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TCP

Protein Properties

Length: 374aa MW: 41026.4 Da PI: 10.1539

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0026s0080.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118	1.2e-36	115	259	3	135
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa........sec....eaessss 80 +k d ski T++g+RdRRvRls+ +a++fFdLqd LGfdk+s t+eWLl+++ +ai el ssss + + sss Kaladp0026s0080.1.p 115 KKSDNRSKIRTAKGLRDRRVRLSIGIARKFFDLQDLLGFDKPSRTLEWLLKNSSKAILELSAASSSSTppqgkaaaG-VvdgfKGLSSSR 203 68999*****************************************************99944444333433331.133333333333 PP TCP 81 sasnsssgkaaksaa.kskksqksaasalnlakesrakarararertrekmriknk 135 s+ + s ++a+ + + k+ k++a+al lakesr+kararar rt+ k ++ k Kaladp0026s0080.1.p 204 STTAYSTNQAELLSCdTALKTMKRKAAALLLAKESREKARARARARTAAKLHTAGK 259 3333333333333333556666677777*******************9987755 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MGLAACSFDT SLLEKKVRVL VLYCHSITQP PGYTRTTMLS SSLLDIVAGS SNTLHHHHQH 60 LQESLYSHIF SDHNAGYNLH HPNPVAKDLQ DDHVPLNSGR VTIITPEPAV ALSKKKSDNR 120 SKIRTAKGLR DRRVRLSIGI ARKFFDLQDL LGFDKPSRTL EWLLKNSSKA ILELSAASSS 180 STPPQGKAAA GVVDGFKGLS SSRSTTAYST NQAELLSCDT ALKTMKRKAA ALLLAKESRE 240 KARARARART AAKLHTAGKS LDHQKSRLLN NHTPYWSADR HYFSSSSLIK LLDNEIQKEE 300 IKAAGGGEQH KQKLQIQLYN YNYGIGSNFE SALNPSLSLD WDISSVLPPP SSSAAPKSNF 360 SGDIDIYSRA NWD*

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MGLAACSFDT SLLEKKVRVL VLYCHSITQP PGYTRTTMLS SSLLDIVAGS SNTLHHHHQH  60
LQESLYSHIF SDHNAGYNLH HPNPVAKDLQ DDHVPLNSGR VTIITPEPAV ALSKKKSDNR  120
SKIRTAKGLR DRRVRLSIGI ARKFFDLQDL LGFDKPSRTL EWLLKNSSKA ILELSAASSS  180
STPPQGKAAA GVVDGFKGLS SSRSTTAYST NQAELLSCDT ALKTMKRKAA ALLLAKESRE  240
KARARARART AAKLHTAGKS LDHQKSRLLN NHTPYWSADR HYFSSSSLIK LLDNEIQKEE  300
IKAAGGGEQH KQKLQIQLYN YNYGIGSNFE SALNPSLSLD WDISSVLPPP SSSAAPKSNF  360
SGDIDIYSRA NWD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.1	1e-20	TCP family protein