PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0026s0045.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 291aa    MW: 31668.9 Da    PI: 8.4008
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0026s0045.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.000163152223
                         EETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                         +C++Cgk F ++ +L  H+r H
  Kaladp0026s0045.1.p 31 SCKICGKAFLTNRQLCGHMRHH 52
                         7*******************99 PP
2zf-C2H210.90.0014201224123
                          EEETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                          y+C++C++ Fs++  L  H ++ H
  Kaladp0026s0045.1.p 201 YSCQNCNRDFSSHQALGGHRSSrH 224
                          99**************99998877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MKAAYGLRQN PKKSLRFSGS GSGSVPDQKM SCKICGKAFL TNRQLCGHMR HHTPGERQGI  60
RCHQCAKNFG SIRALCGHMK SHRALDCTAF LTANGIRKRS RTPRFEVPGT HFDDSAVEDV  120
AISLILLSEG LEFRVSENPG KVELVDSLKS NGSNDPLADL GTEDAKSLNA ELDESVTVEP  180
LSTEVRCDDA MPSVSCSKAK YSCQNCNRDF SSHQALGGHR SSRHKSRRCP SALKTETFHA  240
DHTPVAEPTP HDVQMDGLCL VGVTNFELLK RCNSVDVVPG ASRCYGLLRL *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17180.12e-06C2H2 family protein