PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0025s0031.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 366aa MW: 40232.2 Da PI: 6.3186

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0025s0031.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1e-16	25	72	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEdell ++++ G g+W+t +++ g+ R++k+c++rw +yl Kaladp0025s0031.1.p 25 RGPWTPEEDELLSSYINREGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 72 89****************************99**********97 PP
2	Myb_DNA-binding	46.7	7.2e-15	83	123	6	48
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l Kaladp0025s0031.1.p 83 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 123 89*************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MRKPTSSTTS TSSITPCCTK VGLKRGPWTP EEDELLSSYI NREGEGRWRT LPKRAGLLRC 60 GKSCRLRWMN YLRPSVKRGQ IAPDEEDLIL RLHRLLGNRW SLIAGRIPGR TDNEIKNYWN 120 THLSKKLINQ GIDPRTHKPL SNTTTDPSPS AAAKDDPKAS NLSSALASAA NPNDNTFSAT 180 GLDDVVVNNN GNQRLVQSYV VEDEDDHFQA MMTGNAGLVG PDGNSNFLNS RTSNNNDNEK 240 DQHVDDEINY SSCGGEDVFS SFLNSLINED EVFINNDTGH QLQYPHNQLL QVHHHPIMSG 300 IVTPPPSADN AFGYVNGNNG GVDHSGWETS AALMSSSAGN AAYGELNVCG SRRRINEHHD 360 DQRQL*

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MRKPTSSTTS TSSITPCCTK VGLKRGPWTP EEDELLSSYI NREGEGRWRT LPKRAGLLRC  60
GKSCRLRWMN YLRPSVKRGQ IAPDEEDLIL RLHRLLGNRW SLIAGRIPGR TDNEIKNYWN  120
THLSKKLINQ GIDPRTHKPL SNTTTDPSPS AAAKDDPKAS NLSSALASAA NPNDNTFSAT  180
GLDDVVVNNN GNQRLVQSYV VEDEDDHFQA MMTGNAGLVG PDGNSNFLNS RTSNNNDNEK  240
DQHVDDEINY SSCGGEDVFS SFLNSLINED EVFINNDTGH QLQYPHNQLL QVHHHPIMSG  300
IVTPPPSADN AFGYVNGNNG GVDHSGWETS AALMSSSAGN AAYGELNVCG SRRRINEHHD  360
DQRQL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	1e-79	MYB family protein