PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0024s0903.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | GRAS | ||||||||
Protein Properties | Length: 412aa MW: 46000.8 Da PI: 5.2592 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 179.6 | 2.3e-55 | 160 | 410 | 2 | 263 |
GRAS 2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90 ve L+++A +++sg+l+la+a+L+rl+++ +sp g+p+qR+a+yf+eAL++ l+ +ps+ s + +e++ a+k+fs +sPi Kaladp0024s0903.1.p 160 VEELIRAAGCFDSGELQLAHAMLSRLNQRlRSPLGKPLQRAAFYFKEALNSLLSV-------PTRPSRPSILEIVESIRAHKAFSSISPI 242 689*************************99*********************9998.......444455555669**************** PP GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpf 176 + fs + +Nqa+le++e+++ vHi+Df+i+ G+Q+++L++++a+R+ ++ +RiT+++++e ++e + ++++L +fA+ l+++f Kaladp0024s0903.1.p 243 PMFSDFSTNQAVLESIESSTFVHIVDFEIGLGGQYASLMREIADRSvsskQSRVAIRITAIVEEE--FEKESRLVRDNLCQFAHDLQIRF 330 **********************************************876444569********66..889999***************** PP GRAS 177 efnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adhnsesFlerflealey 263 +++++ +++e+l+ +++++ +E+++V+l +r +++ ++ + P+ vv+v +e + h++ sF + f+e ley Kaladp0024s0903.1.p 331 RIDFVSLRSFEMLSEKSIDFTDDEKTIVHLTPVTFRRT---------GAKFVIDLRLVVPNAVVLVTSEewMTHETVSFRRSFVEGLEY 410 ****9999***********************9888876.........3469999********999988878999************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 412 aa Download sequence |
MRFPGLTPHS AAHLSSSFIP NTAPSSTANF CFEPTSVLDL RRSPSPVHDH FPTTSISDVL 60 SQTEDLSLLP SINDHHQQAA VHNLDDWDSI MRELGLHDDF APSALKAITF PPHHSPSSES 120 GLTQFHDLAS SAIPNPDQPL FSPSDLEFTD WNTSVGFDFV EELIRAAGCF DSGELQLAHA 180 MLSRLNQRLR SPLGKPLQRA AFYFKEALNS LLSVPTRPSR PSILEIVESI RAHKAFSSIS 240 PIPMFSDFST NQAVLESIES STFVHIVDFE IGLGGQYASL MREIADRSVS SKQSRVAIRI 300 TAIVEEEFEK ESRLVRDNLC QFAHDLQIRF RIDFVSLRSF EMLSEKSIDF TDDEKTIVHL 360 TPVTFRRTGA KFVIDLRLVV PNAVVLVTSE EWMTHETVSF RRSFVEGLEY G* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36710.1 | 6e-94 | GRAS family protein |