PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0024s0900.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 224aa MW: 26007.5 Da PI: 8.5955 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60 | 3.7e-19 | 65 | 117 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++t+eq+ Le Fe++r++ ++++++LA++lgL+ rqV vWFqNrRa+ k Kaladp0024s0900.1.p 65 KRKLTEEQTALLELSFENDRKLETDRKKRLAAELGLEPRQVMVWFQNRRARLK 117 4589***********************************************87 PP | |||||||
2 | HD-ZIP_I/II | 100.2 | 1.8e-32 | 64 | 155 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kr+l++eq +lLE sFe+++kLe++rK++la eLgl+prqv vWFqnrRAR k ++lE ++++L+++++ + +++++Le++ L ++l Kaladp0024s0900.1.p 64 RKRKLTEEQTALLELSFENDRKLETDRKKRLAAELGLEPRQVMVWFQNRRARLKCQKLEDEFAKLRSSHNDVLAQKSQLETQIFVLDQKL 153 8**********************************************************************************9999999 PP HD-ZIP_I/II 92 ke 93 k+ Kaladp0024s0900.1.p 154 KN 155 86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MAYCQRSRYG LEKYDEGDYS MLPTSQQLPC HTAEVEFTIP SGEKKQIRRR RKKNKGDENG 60 SVLRKRKLTE EQTALLELSF ENDRKLETDR KKRLAAELGL EPRQVMVWFQ NRRARLKCQK 120 LEDEFAKLRS SHNDVLAQKS QLETQIFVLD QKLKNVEKEL KGLSIWEEVL PAVHSTPTTS 180 SLSAKNQPID GSMFSQESSM QQYLENGFCF QLEDYSNMLT WFG* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 48 | 67 | RRRRKKNKGDENGSVLRKRK |
2 | 49 | 68 | RRRRKKNKGDENGSVLRKRK |
3 | 50 | 69 | RRRRKKNKGDENGSVLRKRK |
4 | 51 | 70 | RRRRKKNKGDENGSVLRKRK |
5 | 63 | 68 | LRKRKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66700.1 | 7e-37 | HD-ZIP family protein |