PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0024s0682.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 290aa MW: 32756.1 Da PI: 5.0223 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.5 | 2.6e-12 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed +l + G ++W+t+++ g+ R++k+c++rw +yl Kaladp0024s0682.1.p 14 RGPWTIDEDHKLMSFILGNGIHCWRTVPKLAGLLRCGKSCRLRWINYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 51.1 | 3.1e-16 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +T+ E+++++++++ lG++ W++Ia+++ gRt++++k++w++ Kaladp0024s0682.1.p 67 RGGFTEAEEDQIIELHAALGNR-WSKIASHFD-GRTDNEIKNHWNT 110 788*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MGRKPCCDKV GLKRGPWTID EDHKLMSFIL GNGIHCWRTV PKLAGLLRCG KSCRLRWINY 60 LRPDLKRGGF TEAEEDQIIE LHAALGNRWS KIASHFDGRT DNEIKNHWNT RIKKRLKEMG 120 VDLASHKSAA KPKQTGNEQP KDQMDADSDS TKEQPAQTAI REETPKVTNA DTQHEGSEDV 180 VVDNNKLSQF EHPGNDDDLL SDYDIFNGSL EVLEHWLNED SLELDGRSSS TSFSLNAPTS 240 ETSTGLHEAQ HSDSVIRDDN DPAYLHQWFD EMDSFFGFSS SLDITNHYE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14340.1 | 3e-83 | MYB family protein |