PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0024s0316.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 325aa MW: 36670.1 Da PI: 7.3489

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0024s0316.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.6	1.2e-06	162	181	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 y+Cp C ksFsr nL+ H+ Kaladp0024s0316.1.p 162 YSCPVCFKSFSRYNNLQMHM 181 99*****************9 PP
2	zf-C2H2	15	7e-05	246	268	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C ksF k + ++H +++ Kaladp0024s0316.1.p 246 FTCRKCQKSFAVKGDWRTHEKNC 268 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MKDLLSPNRS VTKNGLSYFN FIPLNPNPNP FPRTLPLLNN FEPPHSSQAP TPMDEDYDDS 60 FCNRGRSEGG SSAAPLSLNI GLPDDETYSS TVVSPSSSGS KLLELHKSLF GDQSFREEGE 120 EDEDHDNEMG FLQCASLKNL EKSATQYWIP TPTQILIGPT QYSCPVCFKS FSRYNNLQMH 180 MWGHGSQYRK GLDSLRVIQP RAMLRLPCYC CSQSCKHHID HPKSRPLKDF RTLQTHYKRK 240 HGTKTFTCRK CQKSFAVKGD WRTHEKNCGK FWYCTCGSDF KHKRSLKDHI RAFGDDGQVG 300 HAAIGIADDL EHDGDDHGCV IESE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	6e-95	C2H2 family protein