PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0024s0287.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 638aa MW: 72825.8 Da PI: 7.871

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0024s0287.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.9	1.2e-08	465	505	2	39
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkq 39 ++W +eE ell ++v+++++g +W+ I++++g+gR+ + Kaladp0024s0287.1.p 465 KPWGKEEIELLRKGVQKYPKGtsrRWEVISEYIGTGRSVDE 505 69**********************************99765 PP
2	Myb_DNA-binding	28.8	2.9e-09	580	624	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W++ ++ l++a k ++++ +W+++a ++ g+t +qck ++ Kaladp0024s0287.1.p 580 QWSAVQEKALIQALKTFPKEanqRWERVATAVP-GKTVNQCKKKFA 624 7******************************.******9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 638 aa Download sequence
MVPAKNTFRL ITYSEEIVNG EPIFVSSNCL PIKALKYEPA GHAFHEAAMR LIGFFEEEKD 60 EEVEEQKPCS EKEQYMPSSG SYSTKSKKKS GTDSKEQDHY ALLNLSHLRY LATEEQIRKS 120 YRETALKYHP DKQAALLLSE ETEAGNQAKK DEIEAHFKAV QEAYEVLIDP VKRRIYDSTD 180 EFDDEIPTDC APQDFFKVFG PAFMRNGRWS VAQPVPSLGD DDAPLKEVDD FYNFWYGFKS 240 WREFPHADEY DLEQAESRDH KRWMERQNAK LSEKARKEEY VRIRSLVDNA YKRDPRILRR 300 KEEEKAEKQR KKQAKYLAKQ LGEEKAAKEA EEEKHRKEAE DKRAAEANAL QKKAKEKEKK 360 LLRKERSRLR ALSAAVASQS QHNVTLDDME GLCMSLGMDD LKNLCDKMDG KETEDQAETL 420 RRILGHKAST EIDPQDEKKP LYHNGSVTQN GAVFLGGYGK KEKEKPWGKE EIELLRKGVQ 480 KYPKGTSRRW EVISEYIGTG RSVDEILKAT KSVLLQKPDS NKAFDSFLEK RKPSPSIQSP 540 LSTRDDVVDA TNGSSSTGVT EQKPERATAN GAPSSSDPDQ WSAVQEKALI QALKTFPKEA 600 NQRWERVATA VPGKTVNQCK KKFALLKESF RSKKSGE*

Sequence ? help Back to Top

Protein Sequence Length: 638 aa Download sequence

MVPAKNTFRL ITYSEEIVNG EPIFVSSNCL PIKALKYEPA GHAFHEAAMR LIGFFEEEKD  60
EEVEEQKPCS EKEQYMPSSG SYSTKSKKKS GTDSKEQDHY ALLNLSHLRY LATEEQIRKS  120
YRETALKYHP DKQAALLLSE ETEAGNQAKK DEIEAHFKAV QEAYEVLIDP VKRRIYDSTD  180
EFDDEIPTDC APQDFFKVFG PAFMRNGRWS VAQPVPSLGD DDAPLKEVDD FYNFWYGFKS  240
WREFPHADEY DLEQAESRDH KRWMERQNAK LSEKARKEEY VRIRSLVDNA YKRDPRILRR  300
KEEEKAEKQR KKQAKYLAKQ LGEEKAAKEA EEEKHRKEAE DKRAAEANAL QKKAKEKEKK  360
LLRKERSRLR ALSAAVASQS QHNVTLDDME GLCMSLGMDD LKNLCDKMDG KETEDQAETL  420
RRILGHKAST EIDPQDEKKP LYHNGSVTQN GAVFLGGYGK KEKEKPWGKE EIELLRKGVQ  480
KYPKGTSRRW EVISEYIGTG RSVDEILKAT KSVLLQKPDS NKAFDSFLEK RKPSPSIQSP  540
LSTRDDVVDA TNGSSSTGVT EQKPERATAN GAPSSSDPDQ WSAVQEKALI QALKTFPKEA  600
NQRWERVATA VPGKTVNQCK KKFALLKESF RSKKSGE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	1e-122	MYB family protein