PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0024s0184.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 355aa MW: 39082 Da PI: 6.2752

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0024s0184.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.1	3.6e-14	158	204	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+Er+RR+riN+ +++Lr+llP+ +K +Ka+ L ++++++k+L Kaladp0024s0184.1.p 158 KSHSEAERKRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 204 79***********************9.....8**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MKEEDHYSQS IQNFQEQILL QQQIMQSQNM NNSNMMMTSS DHHVYGGGGL IYPSEVSPIL 60 PWSLPQVHPF LPQPPYGPAN SFSVFNRSRA GHPQHQFHNS LQFAYDGIGP SSDHHNLRLL 120 SEALGPVMNQ PGVSPFGGEL GKMTAQEIMD AKALAASKSH SEAERKRRER INNHLAKLRS 180 LLPSTTKTDK ASLLAEVIQH VKELKRQTAT ISETAMVPTE ADELTVDAAD DEYYGKLVIK 240 ASICCEDRPD LLPDLIKTLK ALKLKTLKAE ITTLGGRVKN VLFITGEDHD HCEEGEEMQM 300 QYSVSSIQEV LRGVMEKGGG GSEDGSAGSV KRQRTTNSND ASNMNISMLE NRSG*

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MKEEDHYSQS IQNFQEQILL QQQIMQSQNM NNSNMMMTSS DHHVYGGGGL IYPSEVSPIL  60
PWSLPQVHPF LPQPPYGPAN SFSVFNRSRA GHPQHQFHNS LQFAYDGIGP SSDHHNLRLL  120
SEALGPVMNQ PGVSPFGGEL GKMTAQEIMD AKALAASKSH SEAERKRRER INNHLAKLRS  180
LLPSTTKTDK ASLLAEVIQH VKELKRQTAT ISETAMVPTE ADELTVDAAD DEYYGKLVIK  240
ASICCEDRPD LLPDLIKTLK ALKLKTLKAE ITTLGGRVKN VLFITGEDHD HCEEGEEMQM  300
QYSVSSIQEV LRGVMEKGGG GSEDGSAGSV KRQRTTNSND ASNMNISMLE NRSG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	164	169	ERKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	2e-82	bHLH family protein