PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0024s0154.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | YABBY | ||||||||
Protein Properties | Length: 195aa MW: 21117.8 Da PI: 8.7671 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 141.6 | 8.7e-44 | 37 | 177 | 6 | 163 |
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesasts 95 s++ Cyv+CnfC+t+lav +P + l+++vtv+CGhC++l ++ + + + + l++++ + + + + k+ +s+s Kaladp0024s0154.2.p 37 PSDHFCYVRCNFCSTVLAVGIPCKRLMETVTVKCGHCSNLSFLSTRP-----PLQ--------GQCLDHHQISPQGFCPPELKKGPSSSS 113 79************************************975432222.....222........235666778888888888877777766 PP YABBY 96 vsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 ss ++++ +p++p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafs+aaknWa + Kaladp0024s0154.2.p 114 SSS----TSSEPVSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTAAKNWARY 177 655....66788999*9*************************************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MSGSSAPSSP PSFNLSMNFE DAPQTKDPMD SNLVPPPSDH FCYVRCNFCS TVLAVGIPCK 60 RLMETVTVKC GHCSNLSFLS TRPPLQGQCL DHHQISPQGF CPPELKKGPS SSSSSSTSSE 120 PVSPKAPFVV KPPEKKHRLP SAYNRFMKEE IQRIKAANPE IPHREAFSTA AKNWARYVPN 180 SPSRSNAESS NNAG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 6e-63 | YABBY family protein |