PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0003.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 324aa    MW: 35304.4 Da    PI: 6.5808
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0003.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.21.6e-171462148
                         TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                         rg+W++eEde+l+ +++q+G+g +W + +++ g++R++k+c++rw++yl
  Kaladp0024s0003.1.p 14 RGPWSPEEDEILKSYIQQHGTGgNWIALPSKAGLKRCGKSCRLRWLNYL 62
                         89*********************************************97 PP
2Myb_DNA-binding38.72.4e-1269111246
                          SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                          g++T+eEd  +  +  + G++ W+ Ia+++  gRt++++k++w++
  Kaladp0024s0003.1.p  69 GAFTEEEDRVIFSLYYEIGSR-WSIIAAKLH-GRTDNDVKNHWNT 111
                          89*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MGRAPCCDKA NVKRGPWSPE EDEILKSYIQ QHGTGGNWIA LPSKAGLKRC GKSCRLRWLN  60
YLRPDIKHGA FTEEEDRVIF SLYYEIGSRW SIIAAKLHGR TDNDVKNHWN TKLKKLIMLK  120
DQADAYPEFL RSTKPAHSSF SGSADHESYS FVRFPSLKTE THQESLPPMP NLPPGVSGYD  180
GSSLAFMHHD PAGFTVPAPL LSMPTYHASK ATAIPPNSSE SELSGGSSST MNAGTVSWPD  240
GGGSGVEDGG LLNDILIYGG EGMNNGCRHM FQSTFESGNQ KCSSSEDLGN GAAPTFSAML  300
SDYIYELKPQ GVFQNQNGLI DQY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.11e-69MYB family protein