PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0022s0244.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 345aa    MW: 39348.1 Da    PI: 6.5164
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0022s0244.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix84.11.8e-2634113286
             trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                          W ++e+++Li++rre+++ ++++k++k+lWe++s+kmr++gf rsp++C++kw+nl k+ykk+k++          +++y+++le
  Kaladp0022s0244.1.p  34 WVQEETRCLINFRREVDSLFNTSKSNKHLWEQISIKMRDKGFDRSPTMCTDKWRNLLKEYKKLKHHHATT-----AKISYYKDLE 113
                          ******************************************************************9973.....4577999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MMMEGAVSLA PAHQLLLGES SGDDKAPKKR AETWVQEETR CLINFRREVD SLFNTSKSNK  60
HLWEQISIKM RDKGFDRSPT MCTDKWRNLL KEYKKLKHHH ATTAKISYYK DLEDLMRDRT  120
SHTNAPLHSN KLLDSSSYIH FSHKAIEDAT LAFGHSEAGG HAKVNPESRL DHDSDPLAIN  180
TGETVVPNGV PPWNWRETAG SGEEQPTYDG RVISVKWGEY TRRIGIDGTT DAIKEAVKSA  240
FRLRTKRAFW LEDEYQIIRS IDRDMPLGNY TLHLDEGISI KVCLFDDAGR ITEEKTLYTE  300
DDFREYLQRR GLTGLRELNG YRSIDTLDDL GTGEVYHGVR MIGE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13450.11e-131Trihelix family protein