PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0022s0016.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 289aa MW: 32031.9 Da PI: 8.3097 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.3 | 5.3e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed ll ++++ +G g+W++ ++ g+ R++k+c++rw +yl Kaladp0022s0016.1.p 14 RGPWTPKEDSLLTNYINSHGEGHWRSLPKQAGLLRCGKSCRLRWMNYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 50.8 | 3.7e-16 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++Ed+l+++++++lG++ W++Ia +++ gRt++++k++w++ Kaladp0022s0016.1.p 67 RGNITAQEDDLIIRLHALLGNR-WSLIAGRLP-GRTDNEIKNYWNT 110 7999******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence |
MGRAPCCSKV GLHRGPWTPK EDSLLTNYIN SHGEGHWRSL PKQAGLLRCG KSCRLRWMNY 60 LRPDIKRGNI TAQEDDLIIR LHALLGNRWS LIAGRLPGRT DNEIKNYWNT RLSKKIPSPP 120 KNTKRPKKPS PLVPATASKL LTEPPVEMET KHMIHQPKAV RIGPLNRNVS GLLTSSESNN 180 DTYTSSVSGE INMSSNYNSN SSEGEVDHHA NFAAAENGSA PWSTGDMYNS GIYVDDGTKA 240 PSFSDQLLGY GDEGNNTVWE KLYDEYLQLT NAGYGVELDQ SETQHLLI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 7e-65 | MYB family protein |