PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0021s0037.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 646aa MW: 70539.5 Da PI: 5.9691

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0021s0037.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.2e-30	374	432	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ Kaladp0021s0037.1.p 374 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 432 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 646 aa Download sequence
MCSYIGMCSS NHSSFYGLPR QGNGVVEDDQ EWHHQGDLAY MVGSVSGART RLFSDSSSNW 60 TQPQHLTTDN NDSIITDHQV LLTAAAQENY PFFTFHRDQL QQPAGCFVCP SGHPSDVGDF 120 GGDPFSSIMI RDPLLRDDDM MIKRMNCSSN NHVYYSNNSN ASNNTANSLL PTTANSMMLM 180 ITKSKGFLAD AAGSESSHLF CSSSATEDIS SIIPYSSSCR TIGDHELQEA TQCHEPAAAT 240 TTSSSMISRP NSVVFSQTLQ ISPDLVSQAP LPAPPSTDNK LPISAPHGET LPLKKLAPAS 300 SSLFAVFGGS GDFDSSTNRV LDKIRTANTD TGTLHISPPR NTAIKRRKSL SKKVVCIPAP 360 APVNSRPSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM 420 LVITYTSEHN HPWPTQRNAL AGSTRSQPSK NDISNYPGSN TSQAGTSLLQ QHSKCNNMEE 480 NEKHMGDEPA DANQMISRHI NNEKVTTTSG LVVVMSSPSI AASDTSIKEE LLGDDDHVVG 540 DQNDSNNQQD RDDDCDASHQ LYPTAGATYK YHSNDDNEHW CSDKIYRPSI GDLHVDGNYQ 600 QAPVEQSQDD FFADLGEIAR KNAFSYLDWP SPEHKTASTG PQHDR*

Sequence ? help Back to Top

Protein Sequence Length: 646 aa Download sequence

MCSYIGMCSS NHSSFYGLPR QGNGVVEDDQ EWHHQGDLAY MVGSVSGART RLFSDSSSNW  60
TQPQHLTTDN NDSIITDHQV LLTAAAQENY PFFTFHRDQL QQPAGCFVCP SGHPSDVGDF  120
GGDPFSSIMI RDPLLRDDDM MIKRMNCSSN NHVYYSNNSN ASNNTANSLL PTTANSMMLM  180
ITKSKGFLAD AAGSESSHLF CSSSATEDIS SIIPYSSSCR TIGDHELQEA TQCHEPAAAT  240
TTSSSMISRP NSVVFSQTLQ ISPDLVSQAP LPAPPSTDNK LPISAPHGET LPLKKLAPAS  300
SSLFAVFGGS GDFDSSTNRV LDKIRTANTD TGTLHISPPR NTAIKRRKSL SKKVVCIPAP  360
APVNSRPSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM  420
LVITYTSEHN HPWPTQRNAL AGSTRSQPSK NDISNYPGSN TSQAGTSLLQ QHSKCNNMEE  480
NEKHMGDEPA DANQMISRHI NNEKVTTTSG LVVVMSSPSI AASDTSIKEE LLGDDDHVVG  540
DQNDSNNQQD RDDDCDASHQ LYPTAGATYK YHSNDDNEHW CSDKIYRPSI GDLHVDGNYQ  600
QAPVEQSQDD FFADLGEIAR KNAFSYLDWP SPEHKTASTG PQHDR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34830.1	6e-64	WRKY family protein