PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0021s0010.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 214aa MW: 24080.2 Da PI: 7.4636 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 77.8 | 2.4e-24 | 10 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgy 82 lppG+rF Pt+ +l+ +yL k + + l++ +vi e+d++ ++P +L + v +++++wy +++++++++ g +r t+ gy Kaladp0021s0010.3.p 10 LPPGCRFFPTEPQLLRHYLSGKNSVFDhhLNV-NVIGEFDVLGHDPAELIEigcfeyGVGGRRRHWYCYAPSAERKRVGG--RRRTRGGY 96 79*****************9986665511555.77**************7456776555557779999999988877654..566899** PP NAM 83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 Wk +g+ ++v+ ++g ++g ++ vf + +a+ g tdWv+ ey+l Kaladp0021s0010.3.p 97 WKRKGRVRDVVGEGGVVIGRRTDYVFClrRFEAKCGALTDWVVYEYAL 144 **************************97566999************87 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 214 aa Download sequence |
MADPQAPLPL PPGCRFFPTE PQLLRHYLSG KNSVFDHHLN VNVIGEFDVL GHDPAELIEI 60 GCFEYGVGGR RRHWYCYAPS AERKRVGGRR RTRGGYWKRK GRVRDVVGEG GVVIGRRTDY 120 VFCLRRFEAK CGALTDWVVY EYALIEEDKD FVLCRAFQKS SQRKDVSQVA NFGVSDNSYL 180 HDSLDMASIL EQGDFIELDD LSKPLSSMGN AAS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G27410.2 | 1e-14 | NAC family protein |