PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0021s0007.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 236aa MW: 26222.3 Da PI: 10.8222 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.1 | 1.4e-15 | 31 | 79 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54 +++G+r ++ +g ++AeIrd ++ ++r++lg+f++ e A +a++aa+++l+ Kaladp0021s0007.1.p 31 KFRGIRKRP-WGIYAAEIRDpWK----KTRVWLGTFDSVEAATRAYDAAARSLR 79 79*******.**********883....5**********************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MGKVRGGATA AASLGNQVKD APLEIGSAEL KFRGIRKRPW GIYAAEIRDP WKKTRVWLGT 60 FDSVEAATRA YDAAARSLRC PKAKTNFPTP PSSSIVFIFH RVAFGPSSSI VFMFGVVFES 120 SSSSSEPSSN ISKFNSSSSS SRAELELKKK LSSRVRALRI KARRVRAHVY INRAEFEYCD 180 TRLGSAHLHL CLTKQNTTLI FICSCYARHG IGASIFCSLY FVSVRKKKYD FQLMW* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 1e-24 | ERF family protein |