PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0020s0016.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 247aa MW: 27838.4 Da PI: 7.6154 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.3 | 1.7e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien rqvtfskRr g+lKKA ELSvLCdaevaviifs+tgkl+++ss Kaladp0020s0016.2.p 9 KKIENINSRQVTFSKRRSGLLKKARELSVLCDAEVAVIIFSNTGKLFDFSS 59 68***********************************************96 PP | |||||||
2 | K-box | 60.1 | 9e-21 | 80 | 173 | 5 | 100 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 + +++ + +++ ++ l+ Lk+e+ nLq ++RhllG++L+ Lsl+eLqqLe+qL ++ ++++K +ll+q+e+++ +e+ + en++L Kaladp0020s0016.2.p 80 TVEDKPKVNHQLEKEPLDILKEELANLQLKHRHLLGNELNGLSLNELQQLEDQLTHGFLCVKERK--VLLQQLEQSRLQEQHTTMENETL 167 4444778899999999***********************************************98..89********************* PP K-box 95 rkklee 100 r++++e Kaladp0020s0016.2.p 168 RQQVQE 173 ***987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MGRGKIEIKK IENINSRQVT FSKRRSGLLK KARELSVLCD AEVAVIIFSN TGKLFDFSSH 60 GMKGTIARYS KCQDSSETST VEDKPKVNHQ LEKEPLDILK EELANLQLKH RHLLGNELNG 120 LSLNELQQLE DQLTHGFLCV KERKVLLQQL EQSRLQEQHT TMENETLRQQ VQELKAFLPP 180 AEQPVPSFLT YYPSGLRNAP KKDSVESEFP TENEDSDTTL HLGPPSSVSR KRKASDRESH 240 SNSSGC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13790.1 | 4e-53 | MIKC_MADS family protein |