PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0020s0016.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 249aa MW: 28095.7 Da PI: 7.2384 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.3 | 1.7e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien rqvtfskRr g+lKKA ELSvLCdaevaviifs+tgkl+++ss Kaladp0020s0016.1.p 9 KKIENINSRQVTFSKRRSGLLKKARELSVLCDAEVAVIIFSNTGKLFDFSS 59 68***********************************************96 PP | |||||||
2 | K-box | 70.8 | 4.2e-24 | 80 | 175 | 5 | 100 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 + +++ + +++ ++ l+ Lk+e+ nLq ++RhllG++L+ Lsl+eLqqLe+qL ++ ++++K+++ll+q+e+++ +e+ + en++L Kaladp0020s0016.1.p 80 TVEDKPKVNHQLEKEPLDILKEELANLQLKHRHLLGNELNGLSLNELQQLEDQLTHGFLCVKERKEQVLLQQLEQSRLQEQHTTMENETL 169 4444778899999999************************************************************************** PP K-box 95 rkklee 100 r++++e Kaladp0020s0016.1.p 170 RQQVQE 175 ***987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MGRGKIEIKK IENINSRQVT FSKRRSGLLK KARELSVLCD AEVAVIIFSN TGKLFDFSSH 60 GMKGTIARYS KCQDSSETST VEDKPKVNHQ LEKEPLDILK EELANLQLKH RHLLGNELNG 120 LSLNELQQLE DQLTHGFLCV KERKEQVLLQ QLEQSRLQEQ HTTMENETLR QQVQELKAFL 180 PPAEQPVPSF LTYYPSGLRN APKKDSVESE FPTENEDSDT TLHLGPPSSV SRKRKASDRE 240 SHSNSSGC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13790.1 | 2e-51 | MIKC_MADS family protein |