PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0019s0027.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 319aa    MW: 35466.2 Da    PI: 7.9657
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0019s0027.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.89.5e-14158203555
                          HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          h  +Er+RR+++N++f  L + +P +     kK++Ka++L++A++Y+k+Lq
  Kaladp0019s0027.1.p 158 HITAERNRREKLNQRFIALSSAIPGL-----KKMDKATVLQEATKYVKQLQ 203
                          8899**********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MDQHQNLANL WMVNSQADMS GAIIPTEAPF DDLQHSNYSL YAYQLPIVET AMNDFQINKN  60
PMEQLTTNIR GSYDVSTTSD ADAADAAIYL YSSVNPTGAA WPKQENHCYN NNRPSQFTNG  120
DYPVWNEIYS SMPGREVKGK AANAIGATTS RSSEVQDHIT AERNRREKLN QRFIALSSAI  180
PGLKKMDKAT VLQEATKYVK QLQERIKTLE KQTKSITMME SAVFVKKTLL VINDINKSGF  240
CNETSFSEKT LSDESLPVIE VRFCDKKVLI RVHCDRKKGA AEKILGEIAK LHLTVVNSNV  300
LAFGSSALDV TVLAKVKF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-50bHLH family protein