PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0018s0316.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

SBP

Protein Properties

Length: 812aa MW: 90411.3 Da PI: 5.935

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0018s0316.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	115.2	3.5e-36	151	226	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +Cqv+gCe+d+se+k yh+rh+vC ++++a++v+++g+++r+CqqC++fh ls+fD+ekrsCrr+L++hn+rrr+k Kaladp0018s0316.1.p 151 RCQVPGCEVDISELKGYHKRHRVCLKCANASTVALDGESKRYCQQCGKFHILSDFDDEKRSCRRKLERHNNRRRRK 226 6************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 812 aa Download sequence
MEPSSPKPQP LKPDSQSQIL PQSESELASS SHRPKAAGMD LGFPAMEESE STTLFDWGDL 60 LDFTVDEDQF ALPSPSPFGS DEAPVAGFEE SADRVRKRDP KLTCENFLAG RVPCACPEMD 120 ALLAEEEELR GTGKKRARTV RSAAAAGVVA RCQVPGCEVD ISELKGYHKR HRVCLKCANA 180 STVALDGESK RYCQQCGKFH ILSDFDDEKR SCRRKLERHN NRRRRKLTNA KGPTEDDIPG 240 DPLVEEFCCD VEAGKAIETL TTKTTPDEAL VRSEDVLIAN TCSTFSSQDT RSDSPGSDET 300 NMDGVKERSR YGPPSSNGDN KSAFSSVCPT GRISFKLYDW NPAEFPRRLR HQIFQWLASM 360 PVELEGYIRP GCTILTVFLS MPKFMWVELF KDPASQLQDF ISAPGRLLSG KGTIHVYLDD 420 MRFLIARDGT FVKKVLTDVH APKLHYVHPT FFEAGKPMEF VACGSNLLQQ KFRFLVSFQE 480 KYIANECYLP FSPGHSELES TCHFNHQTYK IYALLIDSDA FGPAFVEVEN QCGLSNYIPV 540 LIGDAEVCAE MERIQQTCVR SFISESSVCE PDNCEVYEAV HSAVSEFVLD IAWLLKKPAS 600 ESLQDNLTSS QIKRYDSVLS HLLLNDSKVI LDRVLKSLSI RISNAEKSSP GYATCEDGIR 660 LLQKRMDQAS NTLRLKRSGL TSPSKNSFSS DALENNIYSE RTSAIHIDEE DTNSSPEHKS 720 VPLEDSTRAQ RSETVPLLCV DDSVKTKHMD KWPRQSCSAI ISSTRIVPHT RTTFSLAAIA 780 LVCFGVCAVM IHPDKVGQFA VIVRRCLFDR S*

Sequence ? help Back to Top

Protein Sequence Length: 812 aa Download sequence

MEPSSPKPQP LKPDSQSQIL PQSESELASS SHRPKAAGMD LGFPAMEESE STTLFDWGDL  60
LDFTVDEDQF ALPSPSPFGS DEAPVAGFEE SADRVRKRDP KLTCENFLAG RVPCACPEMD  120
ALLAEEEELR GTGKKRARTV RSAAAAGVVA RCQVPGCEVD ISELKGYHKR HRVCLKCANA  180
STVALDGESK RYCQQCGKFH ILSDFDDEKR SCRRKLERHN NRRRRKLTNA KGPTEDDIPG  240
DPLVEEFCCD VEAGKAIETL TTKTTPDEAL VRSEDVLIAN TCSTFSSQDT RSDSPGSDET  300
NMDGVKERSR YGPPSSNGDN KSAFSSVCPT GRISFKLYDW NPAEFPRRLR HQIFQWLASM  360
PVELEGYIRP GCTILTVFLS MPKFMWVELF KDPASQLQDF ISAPGRLLSG KGTIHVYLDD  420
MRFLIARDGT FVKKVLTDVH APKLHYVHPT FFEAGKPMEF VACGSNLLQQ KFRFLVSFQE  480
KYIANECYLP FSPGHSELES TCHFNHQTYK IYALLIDSDA FGPAFVEVEN QCGLSNYIPV  540
LIGDAEVCAE MERIQQTCVR SFISESSVCE PDNCEVYEAV HSAVSEFVLD IAWLLKKPAS  600
ESLQDNLTSS QIKRYDSVLS HLLLNDSKVI LDRVLKSLSI RISNAEKSSP GYATCEDGIR  660
LLQKRMDQAS NTLRLKRSGL TSPSKNSFSS DALENNIYSE RTSAIHIDEE DTNSSPEHKS  720
VPLEDSTRAQ RSETVPLLCV DDSVKTKHMD KWPRQSCSAI ISSTRIVPHT RTTFSLAAIA  780
LVCFGVCAVM IHPDKVGQFA VIVRRCLFDR S*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	213	225	RRKLERHNNRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.1	0.0	SBP family protein