PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0018s0269.5.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARR-B
Protein Properties Length: 660aa    MW: 72244.3 Da    PI: 6.7987
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0018s0269.5.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like82.64.2e-26217274155
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHL....QkYRl 55 
                          kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHL    QkYRl
  Kaladp0018s0269.5.p 217 KPRVVWSVELHQQFVAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLqpwlQKYRL 274
                          79*******************.***************************7333368997 PP
2Myb_DNA-binding37.55.7e-12219268147
                          TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 
                          r  W+ e+++++v av+qlG +   +k+I + m+  g+t++++ s++q +
  Kaladp0018s0269.5.p 219 RVVWSVELHQQFVAAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQPW 268
                          678********************************************966 PP
3Response_reg75.22.4e-25381461109
                          EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHH CS
         Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedale 88 
                          vl+vdD+p+ + +l+++le+  y ev+ +  +e a+ ll+e++  +D+++ D+ mp+mdG++ll+    e  +lp+i+++a ++++ + +
  Kaladp0018s0269.5.p  38 VLVVDDDPTCLAILERMLERCLY-EVTKCNRAEIAVSLLQENRngYDVVISDVHMPDMDGFKLLEYVGLEM-DLPVIMMSADDTKAVVMK 125
                          89*********************.*****************999***********************6644.8***************** PP

                          HHHTTESEEEESS--HHHHHH CS
         Response_reg  89 alkaGakdflsKpfdpeelvk 109
                           +  Ga d+l Kp+ +++l +
  Kaladp0018s0269.5.p 126 GVTHGACDYLIKPVRMDALKN 146
                          ****************99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 660 aa     Download sequence    
MNLSSGGNRS MSTVASSCGG NRRPVDAVSD RFPAGLRVLV VDDDPTCLAI LERMLERCLY  60
EVTKCNRAEI AVSLLQENRN GYDVVISDVH MPDMDGFKLL EYVGLEMDLP VIMMSADDTK  120
AVVMKGVTHG ACDYLIKPVR MDALKNIWQH VVRKKKHEWK ELEQSKSREE VENRQAKQAE  180
EADYSSSANE GSWRNSKKRK DEEEDLEDRE DTSTLKKPRV VWSVELHQQF VAAVNQLGID  240
KAVPKKILEL MNVPGLTREN VASHLQPWLQ KYRLYLRRIS GGVPQHPGVI NNGFMGSQEG  300
PFGAMSSLTG LDLQAIAASG HLPGQSLATL QSAVFNKGNT LSGMTMAGMD QRNIFSFENP  360
KIRFGEGQQL QQMTNGKQIN LLHGIPTNVE SKQLTSLHHS ESSIGSVSTQ PNSHGNSSGS  420
LMMQATHPQS RAQLLNEAVS SQFSKAPPSI GLLNVSNGAG VGAVQMRNNN PVHDNRGTGF  480
NLVSQPSPIP SFPINKSELA GSGFPLASAP GVMAAKGMLH DEINSRMKGS VGYTPNYDMF  540
SEIHQPKFHP WELQGVGLQF DCSHRPNTLQ GSAPAVYSSG ERTQYYRTQN TSQQIPGHNS  600
VKIKGERIGD FDSQNNLIPQ HYGQEDLMSA LLKQHPGSDG AADGEFDFDG YPSIGNIPV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.11e-165ARR-B family protein