PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0018s0269.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ARR-B | ||||||||
Protein Properties | Length: 656aa MW: 71719.7 Da PI: 6.7987 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 91.4 | 7.9e-29 | 217 | 270 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl Kaladp0018s0269.3.p 217 KPRVVWSVELHQQFVAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 270 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 42.6 | 1.4e-13 | 219 | 269 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ Kaladp0018s0269.3.p 219 RVVWSVELHQQFVAAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 269 678***********************************************7 PP | |||||||
3 | Response_reg | 75.2 | 2.4e-25 | 38 | 146 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedale 88 vl+vdD+p+ + +l+++le+ y ev+ + +e a+ ll+e++ +D+++ D+ mp+mdG++ll+ e +lp+i+++a ++++ + + Kaladp0018s0269.3.p 38 VLVVDDDPTCLAILERMLERCLY-EVTKCNRAEIAVSLLQENRngYDVVISDVHMPDMDGFKLLEYVGLEM-DLPVIMMSADDTKAVVMK 125 89*********************.*****************999***********************6644.8***************** PP HHHTTESEEEESS--HHHHHH CS Response_reg 89 alkaGakdflsKpfdpeelvk 109 + Ga d+l Kp+ +++l + Kaladp0018s0269.3.p 126 GVTHGACDYLIKPVRMDALKN 146 ****************99976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 656 aa Download sequence |
MNLSSGGNRS MSTVASSCGG NRRPVDAVSD RFPAGLRVLV VDDDPTCLAI LERMLERCLY 60 EVTKCNRAEI AVSLLQENRN GYDVVISDVH MPDMDGFKLL EYVGLEMDLP VIMMSADDTK 120 AVVMKGVTHG ACDYLIKPVR MDALKNIWQH VVRKKKHEWK ELEQSKSREE VENRQAKQAE 180 EADYSSSANE GSWRNSKKRK DEEEDLEDRE DTSTLKKPRV VWSVELHQQF VAAVNQLGID 240 KAVPKKILEL MNVPGLTREN VASHLQKYRL YLRRISGGVP QHPGVINNGF MGSQEGPFGA 300 MSSLTGLDLQ AIAASGHLPG QSLATLQSAV FNKGNTLSGM TMAGMDQRNI FSFENPKIRF 360 GEGQQLQQMT NGKQINLLHG IPTNVESKQL TSLHHSESSI GSVSTQPNSH GNSSGSLMMQ 420 ATHPQSRAQL LNEAVSSQFS KAPPSIGLLN VSNGAGVGAV QMRNNNPVHD NRGTGFNLVS 480 QPSPIPSFPI NKSELAGSGF PLASAPGVMA AKGMLHDEIN SRMKGSVGYT PNYDMFSEIH 540 QPKFHPWELQ GVGLQFDCSH RPNTLQGSAP AVYSSGERTQ YYRTQNTSQQ IPGHNSVKIK 600 GERIGDFDSQ NNLIPQHYGQ EDLMSALLKQ HPGSDGAADG EFDFDGYPSI GNIPV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16857.1 | 1e-168 | ARR-B family protein |