PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0016s0311.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 271aa    MW: 28866.1 Da    PI: 4.955
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0016s0311.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.55.4e-06143165123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          ++C++Cgk+Fs+   L  H+r H
  Kaladp0016s0311.1.p 143 HECGICGKVFSTGQALGGHMRAH 165
                          78*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MEGRNASRGS PSNVSEDHKR DGEDSSDRRG NNQERSSSDS SRHGGERRLN VDEIVITMIT  60
LVAIATSGNV VVHDQSWMTA AIVQSESFIP PPPPPAPAPA PAPTRVINNN ANNDAIPPPE  120
EGCSSGQSPP NKKRKRAEHQ EVHECGICGK VFSTGQALGG HMRAHYPGHL SRTRHANSNV  180
AIASSAASVA APSSYSGATI NNNNNNNINS EVDAEVNDES TVVEHNAANE SDRAASHPRL  240
DIDLNVKPAE MSEEPEEENL EEEGHHSYGD *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.11e-08C2H2 family protein