PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0016s0270.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 429aa MW: 47134.6 Da PI: 5.0174

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0016s0270.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.9	5e-10	240	287	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq Kaladp0016s0270.1.p 240 SHSLAERVRREKISERMKYLQELVPGC----NKITGKAGMLDEIINYVQSLQ 287 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MNRGLPEMML HCLNTSVGVS GGAELTVLER QRAHMKWQQQ QQGLEYGNVY SVLAVGDGGV 60 ENQFQGQLCG ESGVGQVGHP MVKPETELDG AWTGFGNCGM PSAEDFMSCG YADDAAAEYS 120 YQMAKTASCP APPPILGETS EGKDSILSGR TSLGGAKKRK AEKATSLKAV TDKDTNEKKI 180 QEWAEDGESK ITQQNRSTIS KNKKKGEASA DTSKDNSKVS EVPRTDYIHV RARRGQATDS 240 HSLAERVRRE KISERMKYLQ ELVPGCNKIT GKAGMLDEII NYVQSLQRQV EFLSMKLATV 300 NPQLNFNIES LFGKEVFAPC TSSYPTLGAL SEMANQAYTQ FNQLEVVSPG LELRNYQPDM 360 GLQRQLSETY VDTTSFNQNP STWDAELQNL MAMEFQGRST SYPSQPFIGY TEANDPKDGD 420 LNQNIHID*

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MNRGLPEMML HCLNTSVGVS GGAELTVLER QRAHMKWQQQ QQGLEYGNVY SVLAVGDGGV  60
ENQFQGQLCG ESGVGQVGHP MVKPETELDG AWTGFGNCGM PSAEDFMSCG YADDAAAEYS  120
YQMAKTASCP APPPILGETS EGKDSILSGR TSLGGAKKRK AEKATSLKAV TDKDTNEKKI  180
QEWAEDGESK ITQQNRSTIS KNKKKGEASA DTSKDNSKVS EVPRTDYIHV RARRGQATDS  240
HSLAERVRRE KISERMKYLQ ELVPGCNKIT GKAGMLDEII NYVQSLQRQV EFLSMKLATV  300
NPQLNFNIES LFGKEVFAPC TSSYPTLGAL SEMANQAYTQ FNQLEVVSPG LELRNYQPDM  360
GLQRQLSETY VDTTSFNQNP STWDAELQNL MAMEFQGRST SYPSQPFIGY TEANDPKDGD  420
LNQNIHID*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	2e-63	bHLH family protein