PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0016s0254.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | DBB | ||||||||
Protein Properties | Length: 193aa MW: 21423.9 Da PI: 6.9031 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 20.7 | 8.9e-07 | 4 | 42 | 5 | 37 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......H 37 C+ + ++++ fC+ ++ lCe C H+ H Kaladp0016s0254.2.p 4 QCDVCAVEQATVFCTADEAALCEGCDRMVHHVnklaqkH 42 7*****999*****************9996323555555 PP | |||||||
2 | zf-B_box | 30.6 | 7e-10 | 54 | 95 | 2 | 37 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 e++ C+ ++e ++ lfC++++ lC+ C l++H+ H Kaladp0016s0254.2.p 54 EAPLCDICQEARAYLFCKEDRAILCRGCDLSIHQAneltqnH 95 6799*****************************765555555 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 193 aa Download sequence |
MKIQCDVCAV EQATVFCTAD EAALCEGCDR MVHHVNKLAQ KHRRFSLLHP PGKEAPLCDI 60 CQEARAYLFC KEDRAILCRG CDLSIHQANE LTQNHNRYIL TGVKLSTNPS VYQFSSSPSS 120 SADREDLKHK AKSSKSAARS RATTNSDQVL QRSESSSMSN NSTGNISEYL ETLPGWHVED 180 YFDPSPNNYA FC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G75540.1 | 1e-53 | DBB family protein |