PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0016s0229.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 325aa    MW: 36028.7 Da    PI: 8.8871
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0016s0229.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.71.8e-1574121148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          +g+WT+ Ed++lv +++ +G g+W++ ++  g+ R++k+c++rw +yl
  Kaladp0016s0229.1.p  74 KGAWTKGEDDRLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWMNYL 121
                          79******************************99************97 PP
2Myb_DNA-binding55.91e-17127171147
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          rg++T+eEde +++++ +lG++ W++Ia +++ gRt++++k++w+++
  Kaladp0016s0229.1.p 127 RGNFTEEEDEMIIKLHGLLGNK-WSLIAGRLP-GRTDNEIKNYWNTH 171
                          89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MLLIVKNQNH YKNQVPIPHS QTRPPSLPLQ TLTEHQKQRK KQSTATSEYQ PPAAASAASE  60
MGRSPCCEKA HTNKGAWTKG EDDRLVAYIR AHGEGCWRSL PKAAGLLRCG KSCRLRWMNY  120
LRPDLKRGNF TEEEDEMIIK LHGLLGNKWS LIAGRLPGRT DNEIKNYWNT HIKRKLLSRG  180
IDPASHRSID NPSSSPDLHA AASATATISF SAPTKPTQEL DHFNNHTSFV NVFSSKPEEQ  240
TRSSSIEPQD HCPDLNLELK ISPPCPSSNP QQPLIETGAH RLCFSCSLGL RRGEECGCGV  300
RNGSRGSVVM SSVGYDFLEI EIKN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.12e-96MYB family protein