PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0016s0222.4.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 536aa MW: 59996.4 Da PI: 5.7195

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0016s0222.4.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.2	6e-13	309	353	6	55
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 e+ErrRR+++N+++ +Lr l+P + Kl+Ka+iL A++Y+k+L+ Kaladp0016s0222.4.p 309 LEAERRRRKKLNERLYKLRALVPIiS------KLDKASILVDAIDYVKQLK 353 589*******************66......***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MKQSEVGARR SMLNFMDRLR PLVGSKGWDY CAVWRLNQDQ RFLELMGCCC AGADNEQDKL 60 KFLVSPQLPC RDTVFQHQRT ECCDHLCHLP SSVPLNSDIY AEAFFSSQPR WLNVNLNTFS 120 DPQALAKSVE QEVVGTQVLI PVLGGLVELF VAKQVAEDKN VVDFIAAQCA IPLELDALLT 180 SSLQTRTNPA EENPQPGAER NHASPSNSYQ FHQPVANNTN QQACKMSSPK GFSQQFNCDS 240 AAENEPRNID AMMMSGGSGS ASDMPSQSKD GVRLEAGRSD STSDCSDQID DEDEAKCRRR 300 NGKGQSKNLE AERRRRKKLN ERLYKLRALV PIISKLDKAS ILVDAIDYVK QLKKQVEELR 360 KELEQESDNK GDQTPADSVS EFVAPNTRNV AKPMGHEKVQ QMEPQVEVTP VDGSKFFIRV 420 FCEQKPGGFV RLLEALSSLG LEVTNVNVTS YRMLVSNVFQ VEMTRDDIDD HHVAADDLRK 480 SLLELTQIPV EAPWPDPLPD TTSNMPEYGV RADNHFPHHH ALLNHHTSPY HFHHN*

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MKQSEVGARR SMLNFMDRLR PLVGSKGWDY CAVWRLNQDQ RFLELMGCCC AGADNEQDKL  60
KFLVSPQLPC RDTVFQHQRT ECCDHLCHLP SSVPLNSDIY AEAFFSSQPR WLNVNLNTFS  120
DPQALAKSVE QEVVGTQVLI PVLGGLVELF VAKQVAEDKN VVDFIAAQCA IPLELDALLT  180
SSLQTRTNPA EENPQPGAER NHASPSNSYQ FHQPVANNTN QQACKMSSPK GFSQQFNCDS  240
AAENEPRNID AMMMSGGSGS ASDMPSQSKD GVRLEAGRSD STSDCSDQID DEDEAKCRRR  300
NGKGQSKNLE AERRRRKKLN ERLYKLRALV PIISKLDKAS ILVDAIDYVK QLKKQVEELR  360
KELEQESDNK GDQTPADSVS EFVAPNTRNV AKPMGHEKVQ QMEPQVEVTP VDGSKFFIRV  420
FCEQKPGGFV RLLEALSSLG LEVTNVNVTS YRMLVSNVFQ VEMTRDDIDD HHVAADDLRK  480
SLLELTQIPV EAPWPDPLPD TTSNMPEYGV RADNHFPHHH ALLNHHTSPY HFHHN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	298	318	RRRNGKGQSKNLEAERRRRKK
2	312	319	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	2e-47	bHLH family protein