PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0016s0207.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Nin-like
Protein Properties Length: 420aa    MW: 46260.6 Da    PI: 8.4859
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0016s0207.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK93.31.8e-29117167252
               RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                          ek+isl++l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++
  Kaladp0016s0207.1.p 117 EKTISLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 167
                          89***********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    
MSLMPSYHRS SDNESPAKRS RRDQSSWVAE MADAQSQKPG KSVAISLERR SEQAEDKFEM  60
ATFWENVKEE PPQDFEIIRD DYRFKSFNDT GEDSSSLGEC WPGGSVKATD RRRTKSEKTI  120
SLQVLRQYFA GSLKDAAKSI GVCPTTLKRI CRQHGITRWP SRKIKKVSHS LKKLQLVIDS  180
VQGADGSIQI SSFYSNFPEL SSPNFSGATQ SSKVINQVQS TEPDGSDLRN AKTKAGLVSS  240
GDATSSSPSS SSSQNSESSL SFSTGAQHRP NSTLQRVCSD VGLRSPSQDA PPPKLLERSQ  300
SHKLFTDHSI LPPLPKRRGG AFRVKASFGE EKVRFGLHPH WALEDLQQEI ARRFGVDDLG  360
HIQIKYLDDD SEWVLLTCTA DLEECIDVHL SSQSHTIKLS VNKAPHPHLG SSLGSTGCP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35270.11e-102Nin-like family protein