PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0016s0134.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 262aa MW: 28882.5 Da PI: 6.8529 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.9 | 4.3e-17 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ eEd+ l+ +v q+G g+W++ ++ g+ R++k+c++rw +yl Kaladp0016s0134.2.p 15 KGPWSLEEDQVLISYVSQHGHGRWRSLPKLAGLLRCGKSCRLRWTNYL 62 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 45.3 | 2e-14 | 69 | 113 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++T+eE++l +++ lG++ W++Ia+ ++ gRt++++k+ w+++l Kaladp0016s0134.2.p 69 APFTEEEEKLVTQLHGILGNR-WTAIAAQLP-GRTDNEIKNLWNTHL 113 68*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MGKKRPCCEK NGLKKGPWSL EEDQVLISYV SQHGHGRWRS LPKLAGLLRC GKSCRLRWTN 60 YLRPDIKRAP FTEEEEKLVT QLHGILGNRW TAIAAQLPGR TDNEIKNLWN THLRKRLLCM 120 GIDPLTHEPF ATSNGPALAP AAQWESARLE AESLQPGASS DHFLRLWNSE VGEAFRLRAR 180 GAYVSSTSSI KGCCDSDMAS TPAAKIGKGE TCTSPTAASS SSDELDDSSD SALQLLTDYA 240 FDDDMSFLAD HISDYYSFPS M* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 4e-91 | MYB family protein |