PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0016s0076.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 268aa    MW: 30398.1 Da    PI: 7.143
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0016s0076.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.46e-17855148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT+ Ed ll+++++++G g W++++++ g++R++k+c++rw++yl
  Kaladp0016s0076.1.p  8 KGAWTEVEDILLKECIEKYGAGKWHKVPARSGLNRCRKSCRLRWLNYL 55
                         79********************************************97 PP
2Myb_DNA-binding48.42.1e-1561106148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg++ ++E +l+ +++++lG++ W++Ia +++ gRt++++k++w+++l
  Kaladp0016s0076.1.p  61 RGPFEEDEADLIRRLHQLLGNR-WSLIAGRLP-GRTANDIKNYWNTHL 106
                          89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MSHIGVRKGA WTEVEDILLK ECIEKYGAGK WHKVPARSGL NRCRKSCRLR WLNYLQPDIK  60
RGPFEEDEAD LIRRLHQLLG NRWSLIAGRL PGRTANDIKN YWNTHLRKTW QPKASANCGS  120
SHKAHDLGTN TTPNKVEILK PRPWKFSKIS IASHSQQNEL SVQYSFKYDK GNDGSENSPI  180
KEMHPSSCSS ELHEDDLPTS SWWERLLQDE AAILSEETAS GSVEVRQKDE EVPPPAAAKE  240
SGEEGGVLSL HHHEFDIELF WDLLAKT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.11e-63MYB family protein