PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0016s0061.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 346aa MW: 38151.5 Da PI: 8.0319

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0016s0061.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.8	5.8e-14	55	99	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd l+d v++ G g+W +Ia ++ Rt k+c++rw + Kaladp0016s0061.1.p 55 KGPWSPEEDSCLKDFVTRNGVGRWGLIAGELD--RTSKSCRLRWCNQ 99 79***************************8..********985 PP
2	Myb_DNA-binding	38.3	3.1e-12	107	150	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g++T Ede+++ ++ G++ W+ Ia+ + +Rt++q+k+rw++ Kaladp0016s0061.1.p 107 GPFTRKEDEIIISMYEERGSK-WSQIAKALE-RRTDNQVKNRWNSN 150 89*****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MVLINNSHLN LLDDMELSHL VNLIASNSNV DLNQDADEDQ NNNSSDEHER PNGRKGPWSP 60 EEDSCLKDFV TRNGVGRWGL IAGELDRTSK SCRLRWCNQL SPDIYHGPFT RKEDEIIISM 120 YEERGSKWSQ IAKALERRTD NQVKNRWNSN LSKVHRRSQK KVKSAKGSRA NPIRGNSKGS 180 RRPASFKSAS TRPAPTLVSI STAGPFADQV SPAASLKISE ARQFPGSRYR DPASLYLPPA 240 PAAYPDNSAP FACVEAYLPP AFVTPAAHFA SQVHQPANPS PSPAPAFNHL TSLSLFPPGH 300 ETDDVNYLNQ FPDHPAPLEN WTGLMEEIIG VDMEQANGAG RKHTK*

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MVLINNSHLN LLDDMELSHL VNLIASNSNV DLNQDADEDQ NNNSSDEHER PNGRKGPWSP  60
EEDSCLKDFV TRNGVGRWGL IAGELDRTSK SCRLRWCNQL SPDIYHGPFT RKEDEIIISM  120
YEERGSKWSQ IAKALERRTD NQVKNRWNSN LSKVHRRSQK KVKSAKGSRA NPIRGNSKGS  180
RRPASFKSAS TRPAPTLVSI STAGPFADQV SPAASLKISE ARQFPGSRYR DPASLYLPPA  240
PAAYPDNSAP FACVEAYLPP AFVTPAAHFA SQVHQPANPS PSPAPAFNHL TSLSLFPPGH  300
ETDDVNYLNQ FPDHPAPLEN WTGLMEEIIG VDMEQANGAG RKHTK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27920.1	3e-30	MYB family protein