PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0016s0001.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 287aa MW: 32682.9 Da PI: 7.8321 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.9 | 7.5e-16 | 17 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd ll +++ ++G g W+ ++ + g++R++k+c++rw++yl Kaladp0016s0001.2.p 17 KGAWSEEEDALLRECIGKYGEGKWHQVPLKAGLNRCRKSCRLRWLNYL 64 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49 | 1.4e-15 | 70 | 115 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++ +E +l+++++k+lG++ W++Ia +++ gRt++++k++w+++l Kaladp0016s0001.2.p 70 RGEFSMDEADLIIRLHKLLGNR-WSLIAGRLP-GRTANDVKNYWNTHL 115 899*******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
MRRMAADHGH RLYGVRKGAW SEEEDALLRE CIGKYGEGKW HQVPLKAGLN RCRKSCRLRW 60 LNYLKPNIKR GEFSMDEADL IIRLHKLLGN RWSLIAGRLP GRTANDVKNY WNTHLGKKTM 120 LRLQALMNSA AAADYQTKVI KPRPRTFSKT LVQCMRSGQQ QQQGQHFCTN NGSKSSTIKD 180 DAVDLISGKD DDGVDKQIQW WKSLLDDQLS DQELAALASG SCGLVEEEQA GYELPQPPVD 240 DRSGYKIYEE RPKTDFTNEL SFDIELWDFF TDDDQWQTSS GLIQGL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 4e-66 | MYB family protein |