PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0016s0001.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 288aa    MW: 32769.9 Da    PI: 7.8321
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0016s0001.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.97.6e-161764148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+W++eEd ll +++ ++G g W+ ++ + g++R++k+c++rw++yl
  Kaladp0016s0001.1.p 17 KGAWSEEEDALLRECIGKYGEGKWHQVPLKAGLNRCRKSCRLRWLNYL 64
                         79********************************************97 PP
2Myb_DNA-binding47.73.6e-1570116148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg ++ +E +l+++++k+lG+ +W++Ia +++ gRt++++k++w+++l
  Kaladp0016s0001.1.p  70 RGEFSMDEADLIIRLHKLLGNSRWSLIAGRLP-GRTANDVKNYWNTHL 116
                          899*****************************.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MRRMAADHGH RLYGVRKGAW SEEEDALLRE CIGKYGEGKW HQVPLKAGLN RCRKSCRLRW  60
LNYLKPNIKR GEFSMDEADL IIRLHKLLGN SRWSLIAGRL PGRTANDVKN YWNTHLGKKT  120
MLRLQALMNS AAAADYQTKV IKPRPRTFSK TLVQCMRSGQ QQQQGQHFCT NNGSKSSTIK  180
DDAVDLISGK DDDGVDKQIQ WWKSLLDDQL SDQELAALAS GSCGLVEEEQ AGYELPQPPV  240
DDRSGYKIYE ERPKTDFTNE LSFDIELWDF FTDDDQWQTS SGLIQGL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.12e-64MYB family protein