PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0015s0148.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 258aa MW: 28365.5 Da PI: 9.845 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.6 | 2e-20 | 12 | 62 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++ GVr+++ +grWvAeI+d + +r r +lg+++t+eeAa+a+++a+++l+ge Kaladp0015s0148.1.p 12 RFVGVRQRP-SGRWVAEIKDSC---QRVRLWLGTYDTPEEAARAYDEAARALRGE 62 589******.7*********42...35**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MAMGKAAVVG RRFVGVRQRP SGRWVAEIKD SCQRVRLWLG TYDTPEEAAR AYDEAARALR 60 GENARTNYPY SKRPCGSSVN SFGNGDGNHE LSCSSLKAKL SKSLQSVMGR SSESSKSSKN 120 RVSDPLTFAS VFHLRGNGGP QQYRNDTIDK AVQPSIVVPS HEVNQSSSWD SSSLSDSSPD 180 RVTIHSDTSG SDLTEKFFNI ERLTCPNQTM NWGSMLLDNW QGEFTGNTES SRRKKFKVSS 240 SVMVPPTFSS FPFNDVK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 9e-10 | ERF family protein |