PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0015s0080.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Whirly
Protein Properties Length: 277aa    MW: 30310.7 Da    PI: 10.0432
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0015s0080.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly193.14.2e-601022392139
               Whirly   2 vyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvr 91 
                          v+k+kaal+v +v+ptf +ldsg l+l+r+G ++l++ +a++erkydWek+qsfalsatev++l+ l++++sceffhdp++k+sn+G+vr
  Kaladp0015s0080.1.p 102 VFKGKAALSVSPVLPTFRKLDSGGLQLDRRGVMMLNIWPAIGERKYDWEKRQSFALSATEVGSLLTLGPQDSCEFFHDPSMKTSNAGQVR 191
                          9***************************************************************************************** PP

               Whirly  92 kalkvePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139
                          k+l+++  +d sG+f++lsv n+++k+ e+++vPv+ aefav+r++++
  Kaladp0015s0080.1.p 192 KSLSIKANADNSGYFFSLSVANNILKTSERLTVPVTSAEFAVMRTAFS 239
                          *********************************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MAQRLKFVGA LRSKHLFPAS SPTFSIMSHQ FYGNSSEAHQ SRQFLNNEMK LRAPGVMGCS  60
SKSSFTGNSC LYSSLMTCRS LYAQAAASSD NPSSKVYAPY TVFKGKAALS VSPVLPTFRK  120
LDSGGLQLDR RGVMMLNIWP AIGERKYDWE KRQSFALSAT EVGSLLTLGP QDSCEFFHDP  180
SMKTSNAGQV RKSLSIKANA DNSGYFFSLS VANNILKTSE RLTVPVTSAE FAVMRTAFSF  240
ALPHIMGWDR IACQLSAGVS YSTKAAPLVK DMEWDR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71260.12e-87Whirly family protein