PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0013s0034.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 273aa MW: 30021 Da PI: 9.0552 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.8 | 1.4e-19 | 15 | 60 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ l ++v+q+G ++W++I+r ++ gRt+k+c++rw + Kaladp0013s0034.1.p 15 KGPWSPEEDDALHRLVQQHGARNWSLISRSIP-GRTGKSCRLRWCNQ 60 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 52.6 | 1e-16 | 69 | 111 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++eEde +++a++++G++ W+tIar + gRt++ +k++w++ Kaladp0013s0034.1.p 69 PFSQEEDETIIRAHARFGNK-WATIARFLT-GRTDNAIKNHWNST 111 89******************.********9.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence |
MAMSCGRRDS SDRIKGPWSP EEDDALHRLV QQHGARNWSL ISRSIPGRTG KSCRLRWCNQ 60 LSPQVQHRPF SQEEDETIIR AHARFGNKWA TIARFLTGRT DNAIKNHWNS TLKRKCSVMQ 120 SGFDVPEPTR PLKRSVSAGA APVDPIQLYP GSPSGSDSSE SSNNGLVRMA SLSEELETSL 180 SLSLSLPGQV GEQSHSKIGG MTVEQQIAKR IEARMPENGA VALTAEMMAV MQEMIRKEVR 240 SYMAGMEMCS SGSNTGFRDH MGVSQIGFSK IE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67300.1 | 5e-72 | MYB family protein |