PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0012s0093.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HB-other

Protein Properties

Length: 915aa MW: 102233 Da PI: 6.1366

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0012s0093.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	14.8	5e-05	687	747	1	54
TT--SS--HHHHHHHHHHHHHSSS--H..HHHHHHHHHC.....TS-HHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsa..eereeLAkkl.....gLterqVkvWFqNrRak 54 +rkR ++++q+ + e++ +++ +++ ++++ A+kl ++t +q k+W Nr+a+ Kaladp0012s0093.1.p 687 KRKRSVMNEKQISVIEKALLEEPDMQRkaASIQSWADKLcsygsEVTSSQLKNWLNNRKAR 747 79****************977776511689**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 915 aa Download sequence
MRISKEETSS RCGQVIDLVT AVKELHRLTP QELDKSLKDC EDFTLKHTTE KGSTLKINLE 60 RLAQLLPVHL ISKLVASRRD EDLFKYMLCG GRLLHTLYDL ATRHSKLEQI LLDDLKASEQ 120 LIDLVFYTLT VLSNRQEYQD WGSLALVLSA LATCYLYLLP QILSLHWHEL AQILVAHPKV 180 DKFIDVAFRV VRLDIRSLQK TLSSESHDLS TSSTAEQSVN YLSQQCEASL QLIASLCHQK 240 LFRERILKNK EVCREGILPL ARSILNLKLC SFLECAAVVA AVSRLKSKII SILLQLCEVE 300 SPSYLDEVAS YPKSLEVAKD IALEVLEVLK KALSRDLRPP DPCSEKPYPM GLLQPNALRL 360 VDMLSDDSNF RSYIAIHFPE VLTAVVSYPH GEFLSAWCSS VPPLGEEDVS LEFDPFAAAG 420 WILDSFSSLG LLNATYSESN FIQNSLPQAS HAHYKTSLLI KIIANLHFFG PEVCKANEKN 480 LFFNKFYECS FKDLPKASQA YAQKAGTVHK NLRSLLAHAE SLVPSFVNED DIQLFRAFFD 540 QLQTLNPPHE FEARPAESKF DSISSWDKFP KLDINGHFQE AQSNGNQVLL AREHENGVDS 600 RKEQVSENAA TRAENNQNFL MEVDICPQND ESSESDSYNT RGKNCIDQSD NNEFPHASER 660 VAESGSTGLQ DNDYLRTLRS EENRPRKRKR SVMNEKQISV IEKALLEEPD MQRKAASIQS 720 WADKLCSYGS EVTSSQLKNW LNNRKARLAR AAAKDVRVGP DGEMGFLEKQ GGSVSGLRDS 780 PENPAEGISG SSSASARASK TPNIITGSST QLAEGHHAWD LGHNVSLIND LGEEIGKGKV 840 HQLQGEWFGR KLLESCTCVI DVTELTGDVS KHGRVPFPSE ATGDTFEETV KKLGAMCVVW 900 DVGKMRPQPP QQRK*

Sequence ? help Back to Top

Protein Sequence Length: 915 aa Download sequence

MRISKEETSS RCGQVIDLVT AVKELHRLTP QELDKSLKDC EDFTLKHTTE KGSTLKINLE  60
RLAQLLPVHL ISKLVASRRD EDLFKYMLCG GRLLHTLYDL ATRHSKLEQI LLDDLKASEQ  120
LIDLVFYTLT VLSNRQEYQD WGSLALVLSA LATCYLYLLP QILSLHWHEL AQILVAHPKV  180
DKFIDVAFRV VRLDIRSLQK TLSSESHDLS TSSTAEQSVN YLSQQCEASL QLIASLCHQK  240
LFRERILKNK EVCREGILPL ARSILNLKLC SFLECAAVVA AVSRLKSKII SILLQLCEVE  300
SPSYLDEVAS YPKSLEVAKD IALEVLEVLK KALSRDLRPP DPCSEKPYPM GLLQPNALRL  360
VDMLSDDSNF RSYIAIHFPE VLTAVVSYPH GEFLSAWCSS VPPLGEEDVS LEFDPFAAAG  420
WILDSFSSLG LLNATYSESN FIQNSLPQAS HAHYKTSLLI KIIANLHFFG PEVCKANEKN  480
LFFNKFYECS FKDLPKASQA YAQKAGTVHK NLRSLLAHAE SLVPSFVNED DIQLFRAFFD  540
QLQTLNPPHE FEARPAESKF DSISSWDKFP KLDINGHFQE AQSNGNQVLL AREHENGVDS  600
RKEQVSENAA TRAENNQNFL MEVDICPQND ESSESDSYNT RGKNCIDQSD NNEFPHASER  660
VAESGSTGLQ DNDYLRTLRS EENRPRKRKR SVMNEKQISV IEKALLEEPD MQRKAASIQS  720
WADKLCSYGS EVTSSQLKNW LNNRKARLAR AAAKDVRVGP DGEMGFLEKQ GGSVSGLRDS  780
PENPAEGISG SSSASARASK TPNIITGSST QLAEGHHAWD LGHNVSLIND LGEEIGKGKV  840
HQLQGEWFGR KLLESCTCVI DVTELTGDVS KHGRVPFPSE ATGDTFEETV KKLGAMCVVW  900
DVGKMRPQPP QQRK*