PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s1175.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 369aa MW: 40904.7 Da PI: 6.2432

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s1175.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.3	5.5e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++q G+g +W + ++++g++R++k+c++rw++yl Kaladp0011s1175.1.p 14 KGPWSPEEDAKLKSYIEQNGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.4	5.8e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ Kaladp0011s1175.1.p 69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE QNGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QRKEHNHQAR RIDGLKQEIS LMMTMNKEAV DNSMVLSSNC NNTETPYWPE LPVLAPIPYS 180 NQDARSLNDH ASIRRLLMKL GGRFSSDDES IHQGGNMEQL LPINVMSSAP DVTIYPQEGA 240 PSYLAATSSP GALNNPTYPF ENPQFMMEGS GVNLLQGHDQ HQPNHDIGQL VGFNSSSHGM 300 VDGLEFLYGD ELYNNRNGGE GMTYGDMLAR SGSYSVYDTQ PVADSTNSNY DQLGSSFDEL 360 RYSGGVAE*

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE QNGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QRKEHNHQAR RIDGLKQEIS LMMTMNKEAV DNSMVLSSNC NNTETPYWPE LPVLAPIPYS  180
NQDARSLNDH ASIRRLLMKL GGRFSSDDES IHQGGNMEQL LPINVMSSAP DVTIYPQEGA  240
PSYLAATSSP GALNNPTYPF ENPQFMMEGS GVNLLQGHDQ HQPNHDIGQL VGFNSSSHGM  300
VDGLEFLYGD ELYNNRNGGE GMTYGDMLAR SGSYSVYDTQ PVADSTNSNY DQLGSSFDEL  360
RYSGGVAE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	2e-81	MYB family protein