PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s1172.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TALE

Protein Properties

Length: 370aa MW: 41785 Da PI: 6.7988

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s1172.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.2	3.1e-09	292	327	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+ +q+ +WF N+R ++ Kaladp0011s1172.2.p 292 YKWPYPSETEKVALAESTGLDHKQINNWFINQRKRH 327 5679*****************************885 PP
2	ELK	31.1	5.3e-11	247	268	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++KYsgyL+sLkqE+s Kaladp0011s1172.2.p 247 ELKLHLMKKYSGYLSSLKQELS 268 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MLLLSVEIMS SRFPRVFHIS IRSTSANAGP VASPGAGSSS AFRHQYFQSD HHDSGVKREL 60 AVTTSQFLGQ QLHQNPIGII RENGGIERDD DQCPESDDAA AIKAKIMSHP QCSNLLEAYM 120 DCQKVGAPPQ VVAQLVAARE EFEKQQGSSS SSGKDISRDP ELDQFMEAYY DMLLKYREEL 180 TRPLQEAMDF MRRIESQLNM LGASPIRAYN PSDEKSSDGV GSSEEEGDNG GVTDQLPRID 240 PRAEDRELKL HLMKKYSGYL SSLKQELSKK RKKGKLPKEA RQKLLAWWEL HYKWPYPSET 300 EKVALAESTG LDHKQINNWF INQRKRHWKP SEDIQFMVMD GMHHQNASAL YMHGGHYMGP 360 DHCSYRTGP*

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MLLLSVEIMS SRFPRVFHIS IRSTSANAGP VASPGAGSSS AFRHQYFQSD HHDSGVKREL  60
AVTTSQFLGQ QLHQNPIGII RENGGIERDD DQCPESDDAA AIKAKIMSHP QCSNLLEAYM  120
DCQKVGAPPQ VVAQLVAARE EFEKQQGSSS SSGKDISRDP ELDQFMEAYY DMLLKYREEL  180
TRPLQEAMDF MRRIESQLNM LGASPIRAYN PSDEKSSDGV GSSEEEGDNG GVTDQLPRID  240
PRAEDRELKL HLMKKYSGYL SSLKQELSKK RKKGKLPKEA RQKLLAWWEL HYKWPYPSET  300
EKVALAESTG LDHKQINNWF INQRKRHWKP SEDIQFMVMD GMHHQNASAL YMHGGHYMGP  360
DHCSYRTGP*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	263	272	LKQELSKKRK
2	269	273	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-102	TALE family protein