PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s1053.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

SBP

Protein Properties

Length: 361aa MW: 40508.9 Da PI: 7.858

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s1053.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.5	2.9e-41	89	165	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v++C++dls++++yhrrhkvCevhsk+p+v+++g++qrfCqqCsrfh+l+efDe+krsCr+rL++hn+rrrk+q+ Kaladp0011s1053.1.p 89 CLVDDCKSDLSNCRDYHRRHKVCEVHSKTPEVTIQGRKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQP 165 9*************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MDWSSSKGPS WDWPELEQQQ QHSFPANNID IGSGSFSVDL NLGSVIGSSQ TQLGISRSQL 60 PLPSKRARAA AANCSASAVG QQQAATAYCL VDDCKSDLSN CRDYHRRHKV CEVHSKTPEV 120 TIQGRKQRFC QQCSRFHALE EFDEGKRSCR KRLDGHNRRR RKPQPETHLQ QGTYLPNFPG 180 AGMLSFSNPS SHTHSLSSLI SPTGWSGSIN KIEDPYNKQP HLNLLEKQNS VTDYSPSRYR 240 EAQRLTFLQG KHQMNHPEPS DHQVFYDGIA TQAPDSDCAL SLLSRPMLPM HTEINFRNAI 300 PLQPHHHHHA VLSSRQPAGH FSTLQPTVPG SDVNFHDMFQ TGPDESNVKN EPQTLPFYWE 360 *

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MDWSSSKGPS WDWPELEQQQ QHSFPANNID IGSGSFSVDL NLGSVIGSSQ TQLGISRSQL  60
PLPSKRARAA AANCSASAVG QQQAATAYCL VDDCKSDLSN CRDYHRRHKV CEVHSKTPEV  120
TIQGRKQRFC QQCSRFHALE EFDEGKRSCR KRLDGHNRRR RKPQPETHLQ QGTYLPNFPG  180
AGMLSFSNPS SHTHSLSSLI SPTGWSGSIN KIEDPYNKQP HLNLLEKQNS VTDYSPSRYR  240
EAQRLTFLQG KHQMNHPEPS DHQVFYDGIA TQAPDSDCAL SLLSRPMLPM HTEINFRNAI  300
PLQPHHHHHA VLSSRQPAGH FSTLQPTVPG SDVNFHDMFQ TGPDESNVKN EPQTLPFYWE  360
*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	146	163	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	3e-50	SBP family protein